Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0364 ATGGGGTTGGGTGGTGAGAATGGCAAGGTGGTGGAGTCTTGGGATGTGTGTAAATCAAAAGGTGGGAGGAAGAAGAAGAAGAAAGGGGATGCAGAAGAAGTGGAAGAAGGGGCTGAGGCTGAGGCTGGGTGTTGGGTTAGGTTGAGGTTTATTGGGAGCTGCATTTCTTCAAGATCCAAGGTTGATACCTCAGTCAGTGCCAGTGGCATCAGTACTCATTATGCTGAAAGTAAATCAACTAATGATACTAGTAGAGACCAACCAACAGCTCCAGCAGTCTCTTCTACAACCACTAGTAATGCAGAAAGCAATTCGTCCACTTCCAAGCTTGAAGAAGAGCTTAAAATTGCTTCCAGGCTGCGAAAGTTCTCTTTCAATGATCTCAAGTCAGCAACAAGAAATTTTCGGCCTGAGAGTTTTCTTGGTGAAGGTGGGTTTGGTTGTGTTTTCAAGGGGTGGATTGAAGAAAATGGAACTGCTCCAGTGAAACCTGGCACAGGGCTTACGGTTGCTGTAAAAACCCTAAACCATGATGGGCTCCAGGGTCATAAAGAATGGCTGGCTGAAGTGAATTTTCTCGGTGATCTAGTTCATCCAAACCTTGTTAAACTTGTAGGTTACTGCATTGAAGATGATCAAAGGTTGCTAGTGTATGAATTCATGCCTCGGGGTAGCCTGGAAAACCACTTATTTAGGAGATCCATGCCTCTTCCATGGTCCATTAGAATGAAAATTGCACTAGGAGCTGCTAAGGGTCTTGCTTTTCTTCATGAAGAAGCTGAACGACCAGTAATATATAGGGATTTTAAAACTTCAAACATATTACTAGATGCAGACTACAATGCCAAGCTCTCAGACTTTGGTCTTGCCAAAGATGGTCCAGAAGGTGATAAAACCCATGTGTCTACTCGGGTGATGGGAACCTATGGTTACGCAGCACCAGAATATGTCATGACAGGTCATCTTACATCAAAAAGTGATGTGTACAGTTTTGGAGTGGTACTACTTGAGATGTTGACCGGCAGAAGATCCATGGACAAACACCGACCCAATGGTGAGCATAACCTTGTGGAATGGGCTCGACCACATCTAGGAGAGAGGAGAAGGTTCTACAGGTTGATAGACCCTCGCTTGGAAGGTCATTTTTCGGTAAAAGGAGCTCAGAAAGCTGCCCAGCTGGCTGCTCACTGCCTTAGTAGAGATCCAAAATCCAGACCCCTAATGAGTGAAGTTGTAGAAGCTTTAAAGCCTTTGCCAAGCCTCAAGGACATGGCAAGCTCTTCATATTATTTCCAGGCAATGCAAGCTGACCGATTTGGAGCGAGCCCGAACACAAGAAACGGGCGAATGCAAGGTGCATTGCTCACCCGTAATGGACAGCAGCAAAGGAGCCTTTCAATACCAAATGGTACTTATGCATCTCCATATCACCATCAGTTTCCCCAACCATCACCAAAGCCCAATGGCAAAGCCTAG 1476 0.4546 MGLGGENGKVVESWDVCKSKGGRKKKKKGDAEEVEEGAEAEAGCWVRLRFIGSCISSRSKVDTSVSASGISTHYAESKSTNDTSRDQPTAPAVSSTTTSNAESNSSTSKLEEELKIASRLRKFSFNDLKSATRNFRPESFLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRRSMPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKHRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSVKGAQKAAQLAAHCLSRDPKSRPLMSEVVEALKPLPSLKDMASSSYYFQAMQADRFGASPNTRNGRMQGALLTRNGQQQRSLSIPNGTYASPYHHQFPQPSPKPNGKA* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0364 491 ProSiteProfiles Protein kinase domain profile. 135 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso1g0364 491 PANTHER OS01G0588500 PROTEIN-RELATED 66 481 - -
Gso1g0364 491 Gene3D Phosphorylase Kinase; domain 1 94 220 - -
Gso1g0364 491 SUPERFAMILY Protein kinase-like (PK-like) 121 433 IPR011009 -
Gso1g0364 491 Pfam Protein tyrosine and serine/threonine kinase 140 415 IPR001245 GO:0004672|GO:0006468
Gso1g0364 491 PANTHER KINASE APK1B, CHLOROPLAST, PUTATIVE-RELATED 66 481 - -
Gso1g0364 491 MobiDBLite consensus disorder prediction 74 107 - -
Gso1g0364 491 ProSitePatterns Protein kinases ATP-binding region signature. 141 173 IPR017441 GO:0005524
Gso1g0364 491 CDD STKc_IRAK 141 418 - -
Gso1g0364 491 Gene3D Transferase(Phosphotransferase) domain 1 221 435 - -
Gso1g0364 491 MobiDBLite consensus disorder prediction 455 491 - -
Gso1g0364 491 ProSitePatterns Serine/Threonine protein kinases active-site signature. 264 276 IPR008271 GO:0004672|GO:0006468
Gso1g0364 491 MobiDBLite consensus disorder prediction 455 478 - -
Gso1g0364 491 MobiDBLite consensus disorder prediction 74 110 - -
Gso1g0364 491 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0364 Gso-Chr1 4644435 4648559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0364 82 431 Glycoside Hydrolase AT3G07070 51.977 1.23e-117 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gso1g0364 PK_Tyr_Ser-Thr 7.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0364 - - gmx:100787151 940.258