Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0347 ATGTCTAAAAGCGAAGACTTGAAGCTTTTGGGAGGCTGGTTCAGCCCATTTGCCCTGAGGGTGCAGATTGCCCTTAACCTCAAGGGTCTAGAATATCAGGTTGTTGAAGAGACCTTGAATCCCAAAAGTGACCTGCTTCTTAAGTCCAACCCTGTGCACAAGAAAATCCCAGTTTTCTTCCATGGAGATAAAGTCATTTGTGAATCTGCAATCATAGTTGAGTACATTGATGAGGCTTGGACTAATGTTCCCTCCATCCTTCCACAAAATGCTTATGATCGTGCTAATGCTCGATTTTGGTTTGCCTACATTGATGAGAAGTGGTTTACGTCCTTGAGAAGTGTTCTAGTGGCTGAAGATGATGAGGCAAAGAAGCCACACTTTGAGCAAGCAGAAGAAGGGCTTGAGAGGTTGGAAGAAGTGTTCAACAAGTACAGTGAAGGGAAGGCCTATTTCGGAGGAGATAGCATTGGATTCATTGACATTGGTTTTGGGAGCTTCTTGAGTTGGATGAGAGTCATAGAGGAGATGAGTGGAAGAAAATTGCTTGATGAAAAGAAGCACCCTGGTTTGACCCAATGGGCTGAAACGTTTGCTGCTGATCCTGCTGTGAAGGGCATTCTTCCAGAGACTGATAAGCTTGTTGAGTTTGCCAAGATTCTTCAGCTAAAATGGACTGCTGCAGCAGCTGCAGCTGCAAAGTAA 705 0.4454 MSKSEDLKLLGGWFSPFALRVQIALNLKGLEYQVVEETLNPKSDLLLKSNPVHKKIPVFFHGDKVICESAIIVEYIDEAWTNVPSILPQNAYDRANARFWFAYIDEKWFTSLRSVLVAEDDEAKKPHFEQAEEGLERLEEVFNKYSEGKAYFGGDSIGFIDIGFGSFLSWMRVIEEMSGRKLLDEKKHPGLTQWAETFAADPAVKGILPETDKLVEFAKILQLKWTAAAAAAAK* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0347 234 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 221 IPR010987 -
Gso1g0347 234 SUPERFAMILY Thioredoxin-like 6 109 IPR036249 -
Gso1g0347 234 Pfam Glutathione S-transferase, N-terminal domain 6 78 IPR004045 -
Gso1g0347 234 Pfam Glutathione S-transferase, C-terminal domain 100 202 IPR004046 -
Gso1g0347 234 Gene3D - 87 230 - -
Gso1g0347 234 Gene3D Glutaredoxin 1 86 - -
Gso1g0347 234 SFLD Main.3: Omega- and Tau-like 3 229 IPR045073 -
Gso1g0347 234 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 84 IPR004045 -
Gso1g0347 234 SFLD Main (cytGST) 3 229 - -
Gso1g0347 234 CDD GST_C_Tau 91 221 IPR045074 GO:0004364|GO:0006749
Gso1g0347 234 CDD GST_N_Tau 7 80 - -
Gso1g0347 234 PANTHER GLUTATHIONE S-TRANSFERASE U17 6 220 - -
Gso1g0347 234 SUPERFAMILY GST C-terminal domain-like 78 221 IPR036282 -
Gso1g0347 234 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 6 220 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0347 Gso-Chr1 4348505 4350119 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0347 4 221 Glutathione S-transferase Gene Family AT1G10360 56.621 4.31e-88 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0347 K00799 - gmx:547576 437.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0347 1 4348505 4350119 Gso2g0207 2 2160318 2167268 GST