Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso1g0336 | ATGATGCCGGAAAGTGACATCACTCTATCCTCTTTCAGGCTTCGTTGGGACGTGTTCCTGAGCTTCAGGGGCACCGACACGCGGGACACTTTCACCATGAGCCTCTACCACGCTCTCCACCGCCGCGGCCTCCGCGTCTTCCGCGACGACGACGGGCTGGAGCGCGGCGACGAGATCCAGAAGAAGCTTCTGGAAGCCATTGAAGACTCCGCCGCCGCCGTCGTCGTTCTCTCTCCCGATTACGCGTCTTCCCATTGGTGCCTCGACGAACTTGCCAAGATTTGCAAGTGTGGGAGGCTGATCCTTCCGGTTTTCTACTGGGTCGACCCTTCCCATGTCAGAAAGCAAAAGGGTCCCTTTGAGGATTCTTTCGGGTCCCATGCAAACAAGTTTCCTGAAGAGAGTGTTCAGCAGTGGAGGGATGCCATGAAAAAAGTGGGTGGAATCGCTGGTTATGTTTTGGATGAGAAATGTGATAGTGAAAAGAGTGATAAGCTCATTCAGCATTTGGTGCAAATACTTTTGAAGCAGATGAGGAATACACCATTGAATGTGGCTCCTTACACAGTTGGGCTGGACGATAGAGTTGAAGAGTTGAAAAAGCTGTTAGATGTGAAATCCAACGATGTAAGGGTTTTGGGGTTGTATGGAATGGGAGGGGTTGGTAAGACAACCCTAGCCAAGAGCCTCTTCAACAGCCTTGTTGTTCACAATTTTGAGCGACGCAGTTTCATTACAAATATTAGATCACAAGTCTCCAAACATGATGGTTTGGTTTCTCTTCAAAACACAATTCATGGTGATCTTTCTGGTGGGAAAAAGGATCCAATCAACGATGTCAATGATGGTATTTCTGCTATCAAAAGAATAGTACAAGAGAATCGAGTTTTGTTGATCTTAGATGATGTTGATGAAGTAGAGCAGCTTAAATTTTTGATGGGTGAGAGGGAATGGTTTTACAAAGGAAGCCGTGTTGTAATAACCACAAGGGATAGAGAAGTTTTAACTAAGGCTAAGAGTTATGTTGATAAACATTATGAGGTGAAGGAATTGGAATTCTCTCCATCAATGGAATTGTTTTGTTACCATGCAATGAGAAGAAAGGAACCTGCAGAGGGTTTTTTGGACCTTGCAAAGCAAATTGTGGAGAAGACGGGAGGGTTGCCCTTGGCTTTGGAAGTTTTTGGCTCTTTTCTGTTTGACAAGAGGACGATGAGGGAATGGAAAGATGCTGTGGAGAAGATGAAACAGATTAGTCCTTCTGGTATTCATGATGTGCTGAAAATCAGTTTTGATGCGTTGGATGAACAAGAGAAATGTATATTCCTTGACATTGCTTGTTTGTTTGTGCAAATGGAAATGAAGAGGGAGGATGTGGTTGATATATTGAATGGGTGTAATTTTAGAGGAGATATAGCACTGACTGTACTCACTGCAAGATGTCTAATTAAAATCACTGGTGATGGTAAACTGTGGATGCATGATCAAGTTAGAGACATGGGAAGGCAAATTGTGCATAGTGAAAACCTTGCAGACCCTGGTCTACGTAGCAGGCTCTGGGATCGTGATGAAATCTTGATTGTCTTAAAGAGTATGAAGGGAACAAGAAATGTTCAAGGGATAGTCGTAGATTGTGTTAAGAGAAGAATGTCCACTCCTAGAGATCGCTCTGCTGATGAAATTACTTGGGAAAATTTTCGACGTAAGCCTAGTTGTAAATTGGCATTAGAATATATTAAAGAGAAGTATAAAAAGTATGTGCGGGATAGAGAAGAGAAAGCAAAAGAGGTTGTACTTCAGGCTAAGAACTTTGAATCAATGGTTTCCTTAAGATTGCTTCAAATTAATTATTCGAGATTGGAAGGACAATTCAGATGCCTTCCCGCAGGACTGAAATGGCTACAATGGAAACAATGTCCATTAAGGTATATGCCTTCTAGCTATAGTCCTTTGGAACTTGCTGTCATGGATCTCTCGGAAAGTAACATTGAAACTCTGTGGGGCAGAAGCAATAACAAGGTGGCTGAGCACTTGATGGTTTTAAACCTCTCCAATTGCCACCGTTTGACAGCAACTCCTGATTTAACTGGGTATCTCTCTCTTAAAAAAATTGTTTTGGAAGAATGCTCTCATTTAATTAGGATTCATGAATCACTTGGAAATCTAAGTTCCTTAGTTCACTTAAACTTGCGTTTCTGCTATAACCTTGTCGAACTACCTAGTGATGTCTCTGGGATGAAACATCTCGAGGACCTTATTCTTTCCGACTGCTGGAAATTGAAAGCATTACCAAAAGACTTAAGTTGCATGATTTGTTTAAGACAACTTCTTATTGATAACACTGCTGTAACTGAGCTTCCTGAGTCCATCTTCCACCTCACAAAACTTGAAAATCTGAGTGCAAATGGATGCAACTCTCTGAAGAGGTTACCTACCTGCATTGGGAAACTCTGCTCCCTGCAAGAATTGTCACTCAATCATACAGCATTAGAGGAATTGCCATATTCTGTTGGTTCTTTGGAAAAACTAGAGAAGCTTAGTTTGGTGGGGTGCAAGTCACTGTCAGTGATTCCTAACTCTATTGGGAACCTAATTTCATTGGCTCAATTATTTTTTGACATAAGTGGAATTAAAGAATTGCCTGCTTCTATTGGTTCTTTATCATATTTAAGGAAACTGTCTGTGGGAGGCTGCACTTCTCTTGACAAATTGCCTGTGTCAATAGAAGCATTAGTTTCTATTGTTGAACTTCAGTTAGATGGGACAAAAATTACCACTTTGCCAGATCAAATTGGTGCCATGCAAATGTTAGAGAAGCTTGAGATGAAAAATTGTGAGAATCTGAGGTTTCTACCAGTATCATTTGGCTGTCTGTCAGCTCTTACCAGTTTGGACTTGCATGAGACAAATATTACTGAATTGCCAGAATCAATAGGAATGTTGGAAAATCTTATTCGGTTGAGGTTAGACATGTGCAAACAGCTCCAAAGGCTTCCAGATTCCTTTGGAAATTTGAAATCTTTGCAATGGTTACAGATGAAGGAAACAACACTTACTCATCTACCTGATAGCTTTGGGATGCTCACAAGCCTGGTAAAACTAGACATGGAAAGAAGGCTCTATCTTAATGGGGCTACTGGGGCCATAATTCCTAACAAACAAGAACCTAATTCAAAGGCAATATTAAGATCTTTTTGCAACCTAACCTTGCTGGAAGAGTTAAATGCTCATGGATGGGGAATGTGTGGAAAAATTCCAGATGACTTTGAAAAGCTATCATCACTAGAAACTTTAAGTTTAGGCCACAACAATATTTTCAGTCTTCCAGCCAGCATGATAGGACTATCCTATCTCAAAAAGCTTTTATTGTCAGATTGCAGGGAGCTCATTTTTCTGCCTCCTCTTCCATCTAGCCTTGAAGAACTTAATCTTGCGAACTGTATTGCAGTACAGTACATGCATGATATTTCAAACTTGAAGCTCTTAGAGGAGTTGAACCTTACAAATTGTGAAAAGGTGGTGGATATACCAGGCCTTGAACACTTGAAGTCCTTAAGGAGGTTGTACATGAATGGTTGCATTGGATGCTCCCATGCTGTCAAGAGAAGATTTACCAAGGTTCTACTTAAAAAATTGGAGATTTTGATTATGCCTGGAAGCAGAGTCCCGGACTGGTTTACAGCAGAACCAGTTGTCTTTTCCAAGCAAAGAAACCGTGAGCTTAAGGGTATTATTTGTTCTGGTGTTCTCTCTTTCAATAATATACCTGAAAACCAAAGAGAAGGACTGCAGTTAGAGGATGTTCAAGGAAAAATCTTCAATTTGACTGATAAAGTGTTTAGCACAACGTTTCGCCTTCTAGGAGTACCTAGGACAAATAAAGACCACATATTTTTGCGCAGATTTGGAGTTAATTCTTCGTTAGTTTTTCAGTTACAAGATAAATATACCTTACATTTGAAAAAGAGAGACCCTCCTCTTATTGAGAGGCTGGAGCTGAAGAACTGCAGAATTCTTTTAGTTTTTGAAGGCGATGATGATTACGTGGGAGACGAAGGATCACTAGATGAAAGCCAATACTCTGTTTCACAAAAATTAGCCAAGTTCTTCAACTTTGCTGCAAATGACCCATGTGTGTGA | 4140 | 0.4097 | MMPESDITLSSFRLRWDVFLSFRGTDTRDTFTMSLYHALHRRGLRVFRDDDGLERGDEIQKKLLEAIEDSAAAVVVLSPDYASSHWCLDELAKICKCGRLILPVFYWVDPSHVRKQKGPFEDSFGSHANKFPEESVQQWRDAMKKVGGIAGYVLDEKCDSEKSDKLIQHLVQILLKQMRNTPLNVAPYTVGLDDRVEELKKLLDVKSNDVRVLGLYGMGGVGKTTLAKSLFNSLVVHNFERRSFITNIRSQVSKHDGLVSLQNTIHGDLSGGKKDPINDVNDGISAIKRIVQENRVLLILDDVDEVEQLKFLMGEREWFYKGSRVVITTRDREVLTKAKSYVDKHYEVKELEFSPSMELFCYHAMRRKEPAEGFLDLAKQIVEKTGGLPLALEVFGSFLFDKRTMREWKDAVEKMKQISPSGIHDVLKISFDALDEQEKCIFLDIACLFVQMEMKREDVVDILNGCNFRGDIALTVLTARCLIKITGDGKLWMHDQVRDMGRQIVHSENLADPGLRSRLWDRDEILIVLKSMKGTRNVQGIVVDCVKRRMSTPRDRSADEITWENFRRKPSCKLALEYIKEKYKKYVRDREEKAKEVVLQAKNFESMVSLRLLQINYSRLEGQFRCLPAGLKWLQWKQCPLRYMPSSYSPLELAVMDLSESNIETLWGRSNNKVAEHLMVLNLSNCHRLTATPDLTGYLSLKKIVLEECSHLIRIHESLGNLSSLVHLNLRFCYNLVELPSDVSGMKHLEDLILSDCWKLKALPKDLSCMICLRQLLIDNTAVTELPESIFHLTKLENLSANGCNSLKRLPTCIGKLCSLQELSLNHTALEELPYSVGSLEKLEKLSLVGCKSLSVIPNSIGNLISLAQLFFDISGIKELPASIGSLSYLRKLSVGGCTSLDKLPVSIEALVSIVELQLDGTKITTLPDQIGAMQMLEKLEMKNCENLRFLPVSFGCLSALTSLDLHETNITELPESIGMLENLIRLRLDMCKQLQRLPDSFGNLKSLQWLQMKETTLTHLPDSFGMLTSLVKLDMERRLYLNGATGAIIPNKQEPNSKAILRSFCNLTLLEELNAHGWGMCGKIPDDFEKLSSLETLSLGHNNIFSLPASMIGLSYLKKLLLSDCRELIFLPPLPSSLEELNLANCIAVQYMHDISNLKLLEELNLTNCEKVVDIPGLEHLKSLRRLYMNGCIGCSHAVKRRFTKVLLKKLEILIMPGSRVPDWFTAEPVVFSKQRNRELKGIICSGVLSFNNIPENQREGLQLEDVQGKIFNLTDKVFSTTFRLLGVPRTNKDHIFLRRFGVNSSLVFQLQDKYTLHLKKRDPPLIERLELKNCRILLVFEGDDDYVGDEGSLDESQYSVSQKLAKFFNFAANDPCV* | 1380 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso1g0336 | 1379 | ProSiteProfiles | Leucine-rich repeat profile. | 1094 | 1116 | IPR001611 | GO:0005515 | |
Gso1g0336 | 1379 | SMART | LRR_typ_2 | 911 | 934 | IPR003591 | - | |
Gso1g0336 | 1379 | SMART | LRR_typ_2 | 770 | 793 | IPR003591 | - | |
Gso1g0336 | 1379 | SMART | LRR_typ_2 | 1092 | 1115 | IPR003591 | - | |
Gso1g0336 | 1379 | SMART | LRR_typ_2 | 722 | 746 | IPR003591 | - | |
Gso1g0336 | 1379 | SMART | LRR_typ_2 | 1005 | 1027 | IPR003591 | - | |
Gso1g0336 | 1379 | SMART | LRR_typ_2 | 958 | 981 | IPR003591 | - | |
Gso1g0336 | 1379 | SMART | LRR_typ_2 | 817 | 840 | IPR003591 | - | |
Gso1g0336 | 1379 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 11 | 152 | IPR035897 | - | |
Gso1g0336 | 1379 | Pfam | NB-ARC domain | 194 | 417 | IPR002182 | GO:0043531 | |
Gso1g0336 | 1379 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 13 | 1332 | IPR044974 | GO:0006952 | |
Gso1g0336 | 1379 | SUPERFAMILY | L domain-like | 903 | 1221 | - | - | |
Gso1g0336 | 1379 | Pfam | TIR domain | 16 | 178 | IPR000157 | GO:0007165 | |
Gso1g0336 | 1379 | SMART | till_3 | 15 | 149 | IPR000157 | GO:0007165 | |
Gso1g0336 | 1379 | ProSiteProfiles | TIR domain profile. | 14 | 170 | IPR000157 | GO:0007165 | |
Gso1g0336 | 1379 | Gene3D | Ribonuclease Inhibitor | 590 | 872 | IPR032675 | - | |
Gso1g0336 | 1379 | SUPERFAMILY | L domain-like | 492 | 945 | - | - | |
Gso1g0336 | 1379 | PANTHER | TMV RESISTANCE PROTEIN N-LIKE | 13 | 1332 | - | - | |
Gso1g0336 | 1379 | Gene3D | - | 175 | 344 | IPR027417 | - | |
Gso1g0336 | 1379 | PRINTS | Disease resistance protein signature | 212 | 227 | - | - | |
Gso1g0336 | 1379 | PRINTS | Disease resistance protein signature | 290 | 304 | - | - | |
Gso1g0336 | 1379 | PRINTS | Disease resistance protein signature | 385 | 399 | - | - | |
Gso1g0336 | 1379 | PRINTS | Disease resistance protein signature | 838 | 854 | - | - | |
Gso1g0336 | 1379 | Gene3D | - | 13 | 174 | IPR035897 | - | |
Gso1g0336 | 1379 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 179 | 445 | IPR027417 | - | |
Gso1g0336 | 1379 | Gene3D | Ribonuclease Inhibitor | 1056 | 1274 | IPR032675 | - | |
Gso1g0336 | 1379 | Gene3D | - | 351 | 435 | IPR042197 | - | |
Gso1g0336 | 1379 | Gene3D | Ribonuclease Inhibitor | 873 | 1046 | IPR032675 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso1g0336 | Gso-Chr1 | 4214198 | 4222657 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso1g0336 | 783 | 987 | WRKY Transcription Factor Family | AT4G12020 | 33.010 | 2.55e-09 | 60.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso1g0336 | - | - | gmx:100784137 | 2722.19 |