Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0324 ATGTCTGTGAACATGATGCTTCTTCTTGTGATCCTTTTTGTTTTACAAAGTTTTCTAATACCAACATGCTATTGCCAAACCAATACTCCTCAGAATATCGAAATATTTTATCCAATCCAAACTCCAAAACCACCCTTTCCAATCCAACCTCCTGAGTCACAACCAAAGCCACAAGCATCACCACCATCACCAGGACCAGTAGCTGCATCAAAAACCTCTTCATCAAGCAGTAAGATCGGAACAGCGGTGGCTGCAACTGCAGCAGGTACTCTAGTTGTTTCTGGTTTGATTTTCTGCTTGGTCCAAAGGTGCTTCAGAGCAAGGAAGAGAAAGGAGGTCACAAACAACACTGCTTCTGCCGTAGATAGGCGCGTTGCACCTCAGGTCAACGTGTTTGAGAGAATGGAAGGGAACGTCAAGGGACTAATTGTTGATGAGGATGGTTTGGATGTGGTTTATTGGAGAAAACTTGAAGGTAAGAAATTACCAGACAAGGATTTCCAAAGGGAGGTTTTGGATGGCACCCAAGATAAAATAGAAGATGATCATGAGGAGAATCAAAGGAAAAGATCCGAGTCCATTCAAGAAATTCCTCTGCTTAGAGACAGATCTTCAACTTCTCACATGAATATATTTCTTCCAGAAGAGTCATATACAATCATGAGAATTCCACCTCCTGCTCCTCCTCCCAGTGTTCCTTCATCAATTGGAGGCTCTTCTACTCAATCACCTTCTCCACCCTTTACTCCTTCATCACCAAAACCACTCAACACTTCTTTCTCATCAATTTCAAACATTACAAGTCCTGCACTACCAATAACTGATATAAATAATCAAGCACCAGCACCACCTCCTCCACCACCAATCGCAGGTATAAAAAGCTCAGCACTGCCACCGCCTCCTCCACCAATCCCAGTTAAAAAGAACTCGGCAGCAGCACCACCACCTCCTCCACCAATCCCAAATAAAAAGAACTCAGCAGCAGCACCACCTCCTCCACCAATTCCTCCAAGAAAGAGTCCAGCACCACCTCCTCCTCCACCAAAAGCAAGTGGTTTGAAGTCATCATCAAAACCACCACCTACCCCTATTGAAAGAACACCAAGTACCACAACTAGGCAAGGAAATACTTCACCTGAGGTGAAACTGAAGCCATTGCATTGGGATAAGGTGACTACCAACCTTGATCACTCTATGGTGTGGGACAAAATGGACCGTGGTTCTTTCAGGGTTGATGATGATCTTATGGAAGCTCTCTTCGGGTTAGTTGCTACCAACCGAAATGACAATACCCCAAAAGTAAATAACTCAATGAGTCCTAGCAGGGATGCTTTGGCTACTTCAGTGAATACCTTCATTCTTGACCCCAGAAAATCACAAAACATTGCTATTGTTTTGAAGTCTCTGGCAGTCTCTCGTAAAGAAATTATTGAAGCACTCATTGATGGTCAAGGCCTTAACACAGACACCATTGAAAAGCTTGGTAGAGTAGCCCCAACAGAAGAAGAGCAATCACTTATACTTGCACATGAAGGAGACCCTTCAAAACTTGCTGCAGCTGAATCTTTCCTACATCACATCCTCAAAGCTGTTCCTTCAGCATTTAAGCGCTTGAGTGCTTTGTTATTCAGGTTGAATTATGATTCTGAGATTGTAGAAATCAAGGAGTTTCTGCAGACTCTTGAGCTGGGGTGCAAGGAGCTTCGAAACCAAGGAATTTTTGTGAAGCTTCTTGAAGCAGTGCTTAAGGCTGGAAATCGCATGAATGCAGGCACTCAAAGGGGTAATGCTCAAGCTTTCAACTTGGCTTCTCTCAGAAAGCTCTCTGATGTCAAGAGCACTGATGGAAAAACCACATTGCTTCACTTTGTGGTTGAAGAAGTAGTTCGTTCAGAAGGAAAACGTGCTGTTCTTAACCGCAATCACAGTTTGAGTCGTAGTAGCAGTAGGAACAGCAACAGCAGTGTAGACTCTAAAAACTCTGCTGCTTCAAATGAACAAAGACAAAGGGAATACATAACACTAGGATTGCCAGTTGTAGGAGGGATCAGTTCTGAGTTTCCCAACTTAAAGAAAGCTGCGGTTACAGATTACAAAAGTTTTGTTGGTTCAATCTCATCACTCTCAGCCAGGATTGTTGAGATTAGAGAACTTGTTTCCAAGTGTGGAAATGACAAGGGAGGAAACTTTGTGAGAGAAATGAACAATTTTCTTGAAAATGCTGAGGAGGAACTTAGATTAGTGAGGGAGGAGCAAACAAGGGTAATGCAGCTTGTGAGAAGAACGACAGATTATTATCAAGGAGGAGCTTCAAAAGATAGTGTAGAAAACCCTCTTTATCTATTTGTCATAGTTAAGGATTTTCTGGGAATGGTTGATCAAGCATGCATTGAGATTGCTCGTAACATGCAGAAGAGGAAGACACCTAAGGTAAATTAA 2439 0.4272 MSVNMMLLLVILFVLQSFLIPTCYCQTNTPQNIEIFYPIQTPKPPFPIQPPESQPKPQASPPSPGPVAASKTSSSSSKIGTAVAATAAGTLVVSGLIFCLVQRCFRARKRKEVTNNTASAVDRRVAPQVNVFERMEGNVKGLIVDEDGLDVVYWRKLEGKKLPDKDFQREVLDGTQDKIEDDHEENQRKRSESIQEIPLLRDRSSTSHMNIFLPEESYTIMRIPPPAPPPSVPSSIGGSSTQSPSPPFTPSSPKPLNTSFSSISNITSPALPITDINNQAPAPPPPPPIAGIKSSALPPPPPPIPVKKNSAAAPPPPPPIPNKKNSAAAPPPPPIPPRKSPAPPPPPPKASGLKSSSKPPPTPIERTPSTTTRQGNTSPEVKLKPLHWDKVTTNLDHSMVWDKMDRGSFRVDDDLMEALFGLVATNRNDNTPKVNNSMSPSRDALATSVNTFILDPRKSQNIAIVLKSLAVSRKEIIEALIDGQGLNTDTIEKLGRVAPTEEEQSLILAHEGDPSKLAAAESFLHHILKAVPSAFKRLSALLFRLNYDSEIVEIKEFLQTLELGCKELRNQGIFVKLLEAVLKAGNRMNAGTQRGNAQAFNLASLRKLSDVKSTDGKTTLLHFVVEEVVRSEGKRAVLNRNHSLSRSSSRNSNSSVDSKNSAASNEQRQREYITLGLPVVGGISSEFPNLKKAAVTDYKSFVGSISSLSARIVEIRELVSKCGNDKGGNFVREMNNFLENAEEELRLVREEQTRVMQLVRRTTDYYQGGASKDSVENPLYLFVIVKDFLGMVDQACIEIARNMQKRKTPKVN* 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0324 812 MobiDBLite consensus disorder prediction 174 201 - -
Gso1g0324 812 MobiDBLite consensus disorder prediction 639 667 - -
Gso1g0324 812 MobiDBLite consensus disorder prediction 46 73 - -
Gso1g0324 812 Gene3D Formin, FH2 domain 395 811 IPR042201 -
Gso1g0324 812 Coils Coil 731 758 - -
Gso1g0324 812 MobiDBLite consensus disorder prediction 254 275 - -
Gso1g0324 812 MobiDBLite consensus disorder prediction 46 64 - -
Gso1g0324 812 PANTHER FORMIN-RELATED 311 810 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Gso1g0324 812 PANTHER FORMIN-RELATED 5 319 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Gso1g0324 812 SMART it6_source 373 807 IPR015425 -
Gso1g0324 812 MobiDBLite consensus disorder prediction 174 197 - -
Gso1g0324 812 Pfam Formin Homology 2 Domain 377 792 IPR015425 -
Gso1g0324 812 MobiDBLite consensus disorder prediction 220 384 - -
Gso1g0324 812 MobiDBLite consensus disorder prediction 640 667 - -
Gso1g0324 812 SUPERFAMILY Formin homology 2 domain (FH2 domain) 343 807 - -
Gso1g0324 812 MobiDBLite consensus disorder prediction 278 354 - -
Gso1g0324 812 PANTHER FORMIN-LIKE PROTEIN 4 311 810 - -
Gso1g0324 812 PANTHER FORMIN-LIKE PROTEIN 4 5 319 - -
Gso1g0324 812 ProSiteProfiles Formin homology-2 (FH2) domain profile. 373 812 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0324 Gso-Chr1 4010690 4013818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0324 4 807 FH2 protein (formin) Gene Family AT1G70140 44.634 0.0 591
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0324 - - gmx:100780368 1286.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0324 1 4010690 4013818 Gso2g0230 2 2426438 2429651 GST
Gso1g0324 1 4010690 4013818 Gso18g1064 18 18225583 18228353 PCT
Gso18g1064 18 18225583 18228353 Gso1g0324 1 4010690 4013818 PCT