Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0323 ATGGACACGGACGGTGTCGTTTCGTTCAACCATGTCTCGCCGGAGGATTCCCACGAGGTTCATGTCTTGGCCGTCGACGACAGCCTCGTTGATCGAAAGGTCATTGAGCGCTTGCTCAAAATCTCAGCTTGTAAAGTTACGGCTGTGGATAGTGGAATCAGAGCACTGCAATTTCTGGGGCTGGATGAGCAGAGAAGGACCTCTGAATCTGATGGTTTTGTCCCGGATTTGAAGGTGGATCTAATTATCACAGACTACTGCATGCCCGAAATGACCGGTTACGAGTTGCTCAAGAAAATCAAGGAATCGACCATGTTCAGAGAAATTCCAGTAGTGATCATGTCTTCCGAAAACATTTTGCCGCGCATAGACAGATGTTTGGAGGAAGGTGCAGAGGATTTCATAGTGAAGCCAGTGAAATTATCTGATGTAAAACGGTTAAAGGGTTACTTGACACCAAAAGAGGTTATTAAGGTTGACAGAAGAAGTGATGGTTATGTTAACGGTGGCTGCAAAGGTGGTGATGGTGGTGGTGGTGGTGGTGTGGAGATAAACAACAACAAAAGGAAGCTGGAAGAGCAAGACACATCTGACGTGTCAACATCTCCACCGTCCACTTCTACACTTTCATCATCACCCTCCGTTTCTTCACCATCACCGTCATCTTCTCCTACCTCTTCACCCAGCGTGCTTGCTTCTCCGATCAGACGGCTTAAAATGACCAGCACCGATTGA 735 0.4721 MDTDGVVSFNHVSPEDSHEVHVLAVDDSLVDRKVIERLLKISACKVTAVDSGIRALQFLGLDEQRRTSESDGFVPDLKVDLIITDYCMPEMTGYELLKKIKESTMFREIPVVIMSSENILPRIDRCLEEGAEDFIVKPVKLSDVKRLKGYLTPKEVIKVDRRSDGYVNGGCKGGDGGGGGGVEINNNKRKLEEQDTSDVSTSPPSTSTLSSSPSVSSPSPSSSPTSSPSVLASPIRRLKMTSTD* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0323 244 MobiDBLite consensus disorder prediction 197 244 - -
Gso1g0323 244 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-RELATED 11 243 - -
Gso1g0323 244 CDD REC_typeA_ARR 22 147 - -
Gso1g0323 244 MobiDBLite consensus disorder prediction 167 244 - -
Gso1g0323 244 Gene3D - 20 167 - -
Gso1g0323 244 ProSiteProfiles Response regulatory domain profile. 21 152 IPR001789 GO:0000160
Gso1g0323 244 SMART REC_2 20 151 IPR001789 GO:0000160
Gso1g0323 244 Pfam Response regulator receiver domain 22 144 IPR001789 GO:0000160
Gso1g0323 244 PANTHER TWO-COMPONENT RESPONSE REGULATOR 11 243 IPR045279 GO:0009736
Gso1g0323 244 SUPERFAMILY CheY-like 20 146 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0323 Gso-Chr1 3995156 3996512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0323 14 236 Response Regulator Gene Family AT1G59940 56.466 2.30e-70 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gso1g0323 Response_reg 1.8e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0323 K14492 - gmx:100779833 385.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0323 1 3995156 3996512 Gso2g0231 2 2440784 2442209 GST
Gso1g0323 1 3995156 3996512 Gso18g1066 18 18265558 18266907 PCT
Gso18g1066 18 18265558 18266907 Gso1g0323 1 3995156 3996512 PCT