Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso1g0313 | ATGCCGGGGCACCGCTCGAAATCGGAGAAGCATGGCGGCGGCGGCGAGAAGCCGCTCCGGCGGGACCCCTACGAGGTCCTCGGCATCTCGCGCAACTCCACGGATCAGGAAATCAAAACCGCCTACCGCAAAATGGCGCTCAAATATCATCCGGACAAGAATGCAAATGATCCTAAAGCAGCTGATATGTTTAAAGAGGCTACCTTCTCTTATAATATCCTGTCAGATCCTGATAAACGGCGTCAGTACGACTCAGCTGGCTTTGAGGCTGTTGAATCAGACAACCAAGAGTTGGAGTTAGATCTTTCAAGTTTAGGTGCTGTCAATACAATGTTTGCAGCACTTTTTAGTAAACTTGGTGTTCCAATTAAGACAACTGTATCTGCAACTGTTTTGGAAGAGGCACTCAATGGTTTAGTGACCATTCGACCACTTCCATTGGGACATAATATAGCTAAAAGGGTTGAGAAGCAATGTGCACACTTCTATTCAGTTACAATAACAGAAGAGGAAGCACAAGCTGGTTTTGTTTGTCGAGTACAATCGCCAGACAAAAGCAAGTTCAAGTTATTGTATTTCGATCAGGAAGACAACAGTGGTTTAAGTCTTGCACTCCAGGAAGACAGTGCAAAAACAGGGAAGGTTACCTCTGCTGGGATGTATTTTCTTGGGTTTCCTGTTTATCGATTAGATCAAACAATGAACTCTATAGCTGCTGCTAAGGATCCAGATACGTCATTTTTCAGAAAGCTGGATGCGTTTCAGCCCTGTGAATTAACAGAATTGAAGGCTGGTACCCATGTATTTGCTGTTTATGGTGACAACTTTTTCAAAAGTGCAAACTATACAATAGAAGCCCTGTGTGCTGCACCTTTTAGTGAAGAAAAAGAAAATTTAAGAAACATAGAAGCTCAAATTTTGTCTAAAAGGGCAGAAATATCAAAGTTTGAGGCAGAATATCGAGAGGTTCTGGCACAATTCTCAGATATGACAAACAGATATGCACATGAAATGCAAGCAATTGATGAGCTACTGAAGAATAGAAATGAAATACAGGCATCATACACCAGTGCTCCTTTAAAACGGACTACAAGTAGGAGCAGAAGTAAAAATTCTGCCAAGGAGGCAAAAGAAGATGGCCAAGCAAAGGAAAAGAGGAGTACAAGAGAACGGCCAAAGAAGAAGAAATGGTATAACCTCCACTTAAGAGTTGATAAGAGAAAGGCTTGCTAA | 1233 | 0.4234 | MPGHRSKSEKHGGGGEKPLRRDPYEVLGISRNSTDQEIKTAYRKMALKYHPDKNANDPKAADMFKEATFSYNILSDPDKRRQYDSAGFEAVESDNQELELDLSSLGAVNTMFAALFSKLGVPIKTTVSATVLEEALNGLVTIRPLPLGHNIAKRVEKQCAHFYSVTITEEEAQAGFVCRVQSPDKSKFKLLYFDQEDNSGLSLALQEDSAKTGKVTSAGMYFLGFPVYRLDQTMNSIAAAKDPDTSFFRKLDAFQPCELTELKAGTHVFAVYGDNFFKSANYTIEALCAAPFSEEKENLRNIEAQILSKRAEISKFEAEYREVLAQFSDMTNRYAHEMQAIDELLKNRNEIQASYTSAPLKRTTSRSRSKNSAKEAKEDGQAKEKRSTRERPKKKKWYNLHLRVDKRKAC* | 411 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso1g0313 | 410 | PANTHER | DNAJ DOMAIN-CONTAINING PROTEIN-RELATED | 1 | 409 | - | - | |
Gso1g0313 | 410 | CDD | DnaJ | 22 | 76 | IPR001623 | - | |
Gso1g0313 | 410 | Gene3D | DnaJ domain | 14 | 105 | IPR036869 | - | |
Gso1g0313 | 410 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Gso1g0313 | 410 | Pfam | DnaJ domain | 22 | 84 | IPR001623 | - | |
Gso1g0313 | 410 | SMART | dnaj_3 | 21 | 79 | IPR001623 | - | |
Gso1g0313 | 410 | Coils | Coil | 292 | 319 | - | - | |
Gso1g0313 | 410 | MobiDBLite | consensus disorder prediction | 355 | 398 | - | - | |
Gso1g0313 | 410 | PANTHER | DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) | 1 | 409 | - | - | |
Gso1g0313 | 410 | SUPERFAMILY | Chaperone J-domain | 21 | 91 | IPR036869 | - | |
Gso1g0313 | 410 | ProSitePatterns | Nt-dnaJ domain signature. | 64 | 83 | IPR018253 | - | |
Gso1g0313 | 410 | PRINTS | DnaJ domain signature | 24 | 42 | IPR001623 | - | |
Gso1g0313 | 410 | PRINTS | DnaJ domain signature | 42 | 57 | IPR001623 | - | |
Gso1g0313 | 410 | PRINTS | DnaJ domain signature | 59 | 79 | IPR001623 | - | |
Gso1g0313 | 410 | PRINTS | DnaJ domain signature | 79 | 98 | IPR001623 | - | |
Gso1g0313 | 410 | ProSiteProfiles | dnaJ domain profile. | 22 | 87 | IPR001623 | - | |
Gso1g0313 | 410 | MobiDBLite | consensus disorder prediction | 368 | 387 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso1g0313 | Gso-Chr1 | 3833127 | 3837622 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso1g0313 | 20 | 85 | C2H2 Transcription Factor Family | AT1G74250 | 43.662 | 6.64e-11 | 62.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso1g0313 | - | - | gmx:100791554 | 790.415 |