Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0296 ATGGCCACATGGGTGAATGGTTGGGGCAAATTACTACCATTTCTGGGGATGTTGATGGCTATGCTAACTCAAAGTGGAAGCATGGTGGTAATCAAATTTGCTATGACTGATGGGATGAACAAGTATGTTATGGTTGTATATTCAATGGCACTCTCCAGCTCCATACTTCTCCCCTTTGTCTTGTTTCTACATAGCAGGTCAGAGCTTCCTCTTCTCACAGTTCCTGCACTTGGAAGCTTCTTTTTGCTTGCACTCTTTGCGAGTTCAGCACATATAATGGCTTATGTTGGCATAGAACTCAGCTCTCCTACTCTTGCATCAGCTATACTTAATGTCATTCCAGCTTTCACTTTTGTACTTGCTCTCATTTTCAGGATGGAAGAAGTACATTGGAGATATTTTAGCAGCCAAGCTAAAGTCTTGGGAACAATAGTGTCAATTGGTGGAGCATTTGTTGTGATACTGTACAAGGGTCCACCCATCTTTAGGACACATTCATCATACACTTCAAACAAACTTCAATTTTCGGCACAACCAAACTGGATCTTGGGAGGGATATTTTTGGTTGCTGATTCTTTCCTTAGTTCCATGTGGTACATATATCAGGCTTCGGTTGCAAAGAAATACCCTGCTGTAACAGTCATAGTATTCTTCCAATTCTTATTTTCAACCATTCAGTGTGGAGTATTTGCCTTAATTGCAGTTAGAGATCCAACGGAATGGGAGCTGAAGTTCGATAGAGGGTTGAGTGTCATTTTATATCAGGCAATAGTTGCAACAATGTTACGTTACACCCTAACCACATGGTGCGTCCATAGAGCAGGACCTCTGTTTTGTGCTATGTTCAAGCCAGTGGGAATCATCTTCACCGTTTCTATGAGTGCAATCTTTCTGGGGGAGAATTTCGGCCTTGGAAGTTTGATTGGTGCGGTTATAATCGTGATAGGATTTTATGCTGTACTATGGGGAAATTCCAGAGAGGAGAACAAGATTGAGAATTTGGAGTCATCGAGCCATAATGCTCCTTTATTGCAAGATAGGTCGTAA 1047 0.4164 MATWVNGWGKLLPFLGMLMAMLTQSGSMVVIKFAMTDGMNKYVMVVYSMALSSSILLPFVLFLHSRSELPLLTVPALGSFFLLALFASSAHIMAYVGIELSSPTLASAILNVIPAFTFVLALIFRMEEVHWRYFSSQAKVLGTIVSIGGAFVVILYKGPPIFRTHSSYTSNKLQFSAQPNWILGGIFLVADSFLSSMWYIYQASVAKKYPAVTVIVFFQFLFSTIQCGVFALIAVRDPTEWELKFDRGLSVILYQAIVATMLRYTLTTWCVHRAGPLFCAMFKPVGIIFTVSMSAIFLGENFGLGSLIGAVIIVIGFYAVLWGNSREENKIENLESSSHNAPLLQDRS* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0296 348 Pfam EamA-like transporter family 15 154 IPR000620 GO:0016020|GO:0016021
Gso1g0296 348 Pfam EamA-like transporter family 184 321 IPR000620 GO:0016020|GO:0016021
Gso1g0296 348 PANTHER WAT1-RELATED PROTEIN 12 339 - -
Gso1g0296 348 PANTHER WAT1-RELATED PROTEIN 12 339 IPR030184 GO:0016021|GO:0022857
Gso1g0296 348 SUPERFAMILY Multidrug resistance efflux transporter EmrE 226 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0296 Gso-Chr1 3564701 3568943 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0296 10 344 Nodulin-like Gene Family AT5G40240 40.936 4.85e-75 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0296 - - gmx:100816715 674.855