Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0295 ATGGGGAGATGGGTGAATTGTAGGGGCAATATATTCCCATTCCTGGGGATGGTGATGGCTATGCTAGCTCAAAGTGGAAGCATGGTGGTAATCAAAGTTGCCATGACTGATGGAATAAACAAATATGTCATGGTTGTGTACTCTTTGGCACTCTCCACCATCTTGCTTCTTCCCTTTGCCTTGTTTCTTCACAGGTCAGAGCGTCCTCCTCTTACATTCTCTGCACTTTGCAGTTTCTTCTTGCTTGCATTCTTTGGGAGTTCAGGACAGATAATGGCTTATGTTGGCATAGATCTAAGCTCTCCTACTCTTGCATCAGCCATGCTTAATCTCATTCCAGCTTTCACTTTTATACTTGCTCTCATTTTTAGGATGGAAGAAGTACATTGGAAACATTCCAGCAGCCAAGCCAAGTTCTTAGGAACAATAGTATCAATTGCTGGAGCATTTGTTGTGATACTGTACAAGGGCCCACCCATCTTTAAGACACATTTGTCAAACTCTTCGAACAAATTTCTATTTTCGCAGCAACTAAACTGGATCTTGGGAGGGATGTTCTGTGCTGGCGATTCTATAGTTTGTTCCCTGTGGTACATATATCAGGCTTCGGTTGCATACAAATACCCTGCTGTAACAACCATAGTATTCTTCCAACTCTTATTTTCAACCATTCAGTGTGGAGTATTTGCCTTAATTGTAGTTCAAGATCAAACGGAATGGGAGCTGAAGTTAGATATTGGGTTGATTGGCATTGTATATCAGGCAATTGCTGCAACATTGATACGTTACATCTTATGCACGTGGTGCGTCCTTAAAGCTGGACCTCTGTTCTGTTCTATGTTCAAGCCTGTGGCAATCATCTTCTCCGTTTTCATGGGTGCAATTTTTCTCGGGGATGACTTAAGCCTTGGAAGTTTGATTGGTGCGGTTATAATCGTGATAGGATTTTATGCCGTACTGTGGGGAAAATCCATAGAAGATAACAAGATTGAGAAAGGGGTTGAGAACTTGGAGTCATCGTGCCATAATGTTCCTTTATTACAAAATAGGACGTAA 1056 0.4176 MGRWVNCRGNIFPFLGMVMAMLAQSGSMVVIKVAMTDGINKYVMVVYSLALSTILLLPFALFLHRSERPPLTFSALCSFFLLAFFGSSGQIMAYVGIDLSSPTLASAMLNLIPAFTFILALIFRMEEVHWKHSSSQAKFLGTIVSIAGAFVVILYKGPPIFKTHLSNSSNKFLFSQQLNWILGGMFCAGDSIVCSLWYIYQASVAYKYPAVTTIVFFQLLFSTIQCGVFALIVVQDQTEWELKLDIGLIGIVYQAIAATLIRYILCTWCVLKAGPLFCSMFKPVAIIFSVFMGAIFLGDDLSLGSLIGAVIIVIGFYAVLWGKSIEDNKIEKGVENLESSCHNVPLLQNRT* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0295 351 SUPERFAMILY Multidrug resistance efflux transporter EmrE 244 324 - -
Gso1g0295 351 PANTHER WAT1-RELATED PROTEIN 12 345 - -
Gso1g0295 351 Pfam EamA-like transporter family 187 320 IPR000620 GO:0016020|GO:0016021
Gso1g0295 351 Pfam EamA-like transporter family 15 153 IPR000620 GO:0016020|GO:0016021
Gso1g0295 351 PANTHER WAT1-RELATED PROTEIN 12 345 IPR030184 GO:0016021|GO:0022857
Gso1g0295 351 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0295 Gso-Chr1 3555327 3558948 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0295 4 336 Nodulin-like Gene Family AT5G40240 43.402 6.32e-80 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0295 - - gmx:100816194 668.692