Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0294 ATGCAAGGCGCAGTAACTGCAGCAATGGTTGTGTGCCTCTTCTTGACCGTGGGTTTGAACACTCTCATAAAAGCAAACATGTCTAAAGGAATGAGCAATTTCGTTTTCGTTGCGTATTCAAACCTTCTCGCGTTCGTTTTTCTGCTACTAGCAACCACAATCCGCCACAGAAACAGGGCTCCTACACCAATCACTAATTCAATTATCTTCAGAATTTTTCTTATTAGCTTGCTCAGCGTTTCTGTTCAGACGCTTTATTATATTGGACTTGGATATAGCTCTCCCACTCTTGGCTCAACCATGGAGGACCTTGTTCCAGCTTATACTTTCATTATTGCCATTGTTTCCAGGATGGAAAAGCTGGATTTAAAACTACGAAGTTGTTGGGCAAAATCTATTGGGACTGTGGTCTCAATTGTTGGAGCATTAACTGTGACCTTATACAAGGGGTTGCCTATGACAAGTGGTTTGGTGTCAAACGATGTGATTCTCTCATCACAACCATCAAAATGGCTGTTAGGAGGCTTTCTTCTTGCAATTGGTACCTTTTGTGGTTCAGTCTCGCTTGTTATCCAGACCTGGACTATCAAAGACTACCCTGAAGAGCTAATACTAATAACCATTAGTACCAGTTTCTCTGTTATCCTATCTTTCATAACTGCTTTCGTTGCAGAGGAAAATCCTAAGGCATGGATACTTAAACCTGATATGAAGTTGGTGTGCATATTCTATTCAGCAATCTTTGTGATGTCTACACGAAGTGTGGTGTATGCATGGGCATGTCGAAAGAAGGGGGCTGTATATGTTGCTATGTTCAGTCCTTTAGAAATTGTCATTGCACTTGCAATGGGGGTTGCATTTTTGGGAGACGCTTTATATCTTGGAAGTATGATAGGAGCTGCTATAATAGCAGTTGGGTTTTATGGTGTAATATGGGGCCAAGCTCAAGAGGAAAAGATTGTCTGTGAAAATTATGAAATTAGTACCATTATCTCATCGTCATCTTCTGAAGCCGCATTATTGCTGGACCAAAGCAAGGGCAAAAGTTCTTTTGTATGA 1059 0.4098 MQGAVTAAMVVCLFLTVGLNTLIKANMSKGMSNFVFVAYSNLLAFVFLLLATTIRHRNRAPTPITNSIIFRIFLISLLSVSVQTLYYIGLGYSSPTLGSTMEDLVPAYTFIIAIVSRMEKLDLKLRSCWAKSIGTVVSIVGALTVTLYKGLPMTSGLVSNDVILSSQPSKWLLGGFLLAIGTFCGSVSLVIQTWTIKDYPEELILITISTSFSVILSFITAFVAEENPKAWILKPDMKLVCIFYSAIFVMSTRSVVYAWACRKKGAVYVAMFSPLEIVIALAMGVAFLGDALYLGSMIGAAIIAVGFYGVIWGQAQEEKIVCENYEISTIISSSSSEAALLLDQSKGKSSFV* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0294 352 PANTHER WAT1-RELATED PROTEIN 14 317 - -
Gso1g0294 352 PANTHER WAT1-RELATED PROTEIN 14 317 IPR030184 GO:0016021|GO:0022857
Gso1g0294 352 SUPERFAMILY Multidrug resistance efflux transporter EmrE 235 315 - -
Gso1g0294 352 Pfam EamA-like transporter family 173 311 IPR000620 GO:0016020|GO:0016021
Gso1g0294 352 Pfam EamA-like transporter family 9 145 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0294 Gso-Chr1 3546066 3552576 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0294 7 320 Nodulin-like Gene Family AT5G40240 40.994 7.47e-74 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0294 - - gmx:100305655 649.047