Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0293 ATGCAGGGCGCAGGGGTAACCTTTGTAATGGTTGTGGTTCAGGTCTTGAGTGTGGGTTTGAACACTATGATCAAAGCATCATTGTCCAAAGGGATGAGCATTTTTGTTTTTGTTGCGTATTCAAACCTTTTCGCATTCTGTTTTCTGCTTCAAGCAACCACAATTCGTCACAGAAACAGAGCTCCCACACCGATCAATAATTCCATACTCTTCAGGATTTTTGTTCTTGGCTTGCTCAGCGTTTCCATACAGACGCTCATTTATACTGGACTTGGGTATAGCTCTCCCACTCTGACGTCAACCATGGAGGATCTTATTCCAGCTTATACTTTCATAATTGCCATTATTTCCAGGATGGAAAAGTTGGATCTAAAACTACAAAGCTGCCAAGCAAAATCCATTGGGACTGTGATCTCAATTGCTGGAGCATTAATTATGACCTTATACAAGGGATTGCCTATGACAAGTGATGTGATGCCAAACAATGTTTTTCTTTCATCTCAACAATCCAAATGGCTACTAGGAGGATTTCTCCTTGCAGTTGGTTGCTTTTTTTGTTCAATCTCGCTTGTTATTCAGACATGGACTATCAAAGACTACCCTGAGGAGCTAATGTTGATAACCATTAGTACCAGTCTCTCTGTTATCCTATCTTTCATAGTGGCTTTCATTGCAGAAGAAAATCCTAAGGCATGGACACTTAAACTTGATATGGAGTTGGTGTGCATACTTTATTCAGCAATTTTTGTGATGTCTACACGAAATGTGGTGAATGTATGGGCGTGTCGAAAGAAGGGGCCTGTATATGTTGCTATGTTCAGTCCTTTAGGGATTGTCATAGCACTTGCCATGGGGATTGTATTTTTGGGAGATGCTTTATATCTTGGAAGTTTGATAGGAGCTGCTATAATAGCTATTGGGTTTTATGCTGTAACATGGGGCCAGGCTCAAGAGGAAACAATGGGTTACGAAAAGCATGGAACTTGTAGCATTATCTCATCGCCTTCTTCTGAAACCCCTCTATTGCTGAACAAAAGCAAAGATTCAAGTTATTTTGTTTGA 1062 0.4049 MQGAGVTFVMVVVQVLSVGLNTMIKASLSKGMSIFVFVAYSNLFAFCFLLQATTIRHRNRAPTPINNSILFRIFVLGLLSVSIQTLIYTGLGYSSPTLTSTMEDLIPAYTFIIAIISRMEKLDLKLQSCQAKSIGTVISIAGALIMTLYKGLPMTSDVMPNNVFLSSQQSKWLLGGFLLAVGCFFCSISLVIQTWTIKDYPEELMLITISTSLSVILSFIVAFIAEENPKAWTLKLDMELVCILYSAIFVMSTRNVVNVWACRKKGPVYVAMFSPLGIVIALAMGIVFLGDALYLGSLIGAAIIAIGFYAVTWGQAQEETMGYEKHGTCSIISSPSSETPLLLNKSKDSSYFV* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0293 353 PANTHER WAT1-RELATED PROTEIN 13 318 IPR030184 GO:0016021|GO:0022857
Gso1g0293 353 PANTHER WAT1-RELATED PROTEIN 13 318 - -
Gso1g0293 353 SUPERFAMILY Multidrug resistance efflux transporter EmrE 236 316 - -
Gso1g0293 353 Pfam EamA-like transporter family 9 147 IPR000620 GO:0016020|GO:0016021
Gso1g0293 353 Pfam EamA-like transporter family 174 312 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0293 Gso-Chr1 3533659 3539278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0293 10 352 Nodulin-like Gene Family AT5G40240 39.031 7.82e-79 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0293 - - gmx:100814600 642.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0293 1 3533659 3539278 Gso2g0270 2 2917491 2920947 GST