Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0290 ATGGAAGAACATCTCACTCCATTGGCTGTTACCCATCTCCTTCAACACACTCTCAGAAGTTTGTGCATCCATGAAAATTCTCAATGGGTCTACGCAGTCTTCTGGAGGATCTTGCCTAGAAACTACCCTCCACCCAAGTGGGAAGGACAAGGGGCTTATGATAGATCAAGAGGAAACAGAAGGAATTGGATATTGGTGTGGGAAGATGGTTTCTGCAATTTTGCTGCATCAGCAGCACCTGAAGTTAACTCTGGTGATTGTTCTACCCCACCTGTTTATGGGAACTGTGAATTTCAGCCCTACCAAGGGCTGCAACCGGAGCTCTTCTTCAAGATGTCACATGAGATCTATAACTATGGAGAAGGGTTGATAGGAAAAGTGGCTGCAGATCACAGCCACAAGTGGATAAACAAAGAGCCTAATGATCAAGAAATCAACTTCTTGTCAGCATGGCACAATTCAGCAGATTCGCACCCTAGGACTTGGGAAGCCCAGTTCCTGTCTGGTATAAAGACCATAGCTCTTATTGCTGTAAGAGAAGGTGTTGTTCAATTAGGAGCTGTTCACAAGGTTATTGAAGACCTGAGCTATGTGGTTCTTTTGAGAAAAAAGTTCAGCTACATTGAGAGCATCCCTGGTGTGCTGTTGCCACACCCTTCATCTTCAGCATACCCTTATAAAATAGAAGGAGGAGGGTATGGAGCACCAGAACAATGGCATTATCAAGGCGGCAACAACCATCACCACCTTGCATCACCCCAACAAACTGAACTATATGATCACCATGGCCACTTCAACTTGCCACTCAAGATAACTCCTTCAATGAGTAGCCTTGAGGCACTTCTCTCCAAGCTCCCCTCAGTGGTGCCACCAACAACAACACAACAACAACCACTCTTGCCATCTAATTCCCAGCAACAACAACGAAGGCCATTGGAGTTCATCATGGGAATGCAGAAAGTGGCAAAGGAAGAGTTGGAACAAGAAGAGGTGTACAGGCCAGAACTTGACATAGGTGAGAGTAGCAGCTCCTTGCCAGGAGGAGGGTACCACCAACACCAACATCAACATCACTTCCATCAAGATCAGAATAATAATGTAACTAGGAGTGGAGCCAACAATGGATTTTGA 1131 0.4553 MEEHLTPLAVTHLLQHTLRSLCIHENSQWVYAVFWRILPRNYPPPKWEGQGAYDRSRGNRRNWILVWEDGFCNFAASAAPEVNSGDCSTPPVYGNCEFQPYQGLQPELFFKMSHEIYNYGEGLIGKVAADHSHKWINKEPNDQEINFLSAWHNSADSHPRTWEAQFLSGIKTIALIAVREGVVQLGAVHKVIEDLSYVVLLRKKFSYIESIPGVLLPHPSSSAYPYKIEGGGYGAPEQWHYQGGNNHHHLASPQQTELYDHHGHFNLPLKITPSMSSLEALLSKLPSVVPPTTTQQQPLLPSNSQQQQRRPLEFIMGMQKVAKEELEQEEVYRPELDIGESSSSLPGGGYHQHQHQHHFHQDQNNNVTRSGANNGF* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0290 376 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 1 355 - -
Gso1g0290 376 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK (WITH NO LYSINE)-LIKE PROTEIN 1 355 - -
Gso1g0290 376 MobiDBLite consensus disorder prediction 289 309 - -
Gso1g0290 376 MobiDBLite consensus disorder prediction 338 376 - -
Gso1g0290 376 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 14 205 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0290 Gso-Chr1 3444514 3447388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0290 15 205 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 30.964 4.27e-14 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0290 - - gmx:100816910 735.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0290 1 3444514 3447388 Gso2g0271 2 2952744 2955256 GST