Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0282 ATGAGACTCACGAATACGCATGCGATGGATCTAGAAGGTGGAACAACTCGTCGAAACTCCGTTAAGAGAGAGTCGTGGAGAACGGTTGTGACTCTGGCGTACCAGAGTTTAGGAGTGGTGTACGGTGATTTGAGCATTTCGCCGTTGTACGTTTTCAGAAGCACGTTTGCGGAGGACATTAAGCACACGGAGAGCAACGAGGAGGTTTTCGGCGTTTTGTCGCTGGTTTTCTGGACCATAACGCTGGTCCCGCTGCTCAAGTACGTTTTCGTGGTGTTAAAAGCTGACGATAACGGCGAAGGAGGCACTTTCGCGCTTTATTCCTTGTTGTGCCGCCACGCCAGAGTGAGTTCTCTCCCGAATTGCCAGGTGGCGGACGAGGAGCTGTCGGAGTACAGAAAGGATTCCCGCGGCGCGGCTCCCGAGAGCAGCTTTGCGGCGCGGCTCAGAAGCACGTTTGAGAAGCACAAGGTTTTGCAGAGGGTTTTGCTGGTTTTGGCGCTGATTGGGACTTGCATGGTCATTGGAGATGGCATCTTCACCCCGGCTATTTCTGTTTTCTCGGCTGTGTCTGGACTGGAGCTTTCAATGTCCAAGGAGAAGCACGCATATGTCGAAGTTCCAGCTGCATGCATCATATTGATAGGCTTGTTTGCCCTTCAACATTATGGCACACACAGAGTTGGCTTCTTGTTTGCTCCTGTAATTATCACATGGCTTTTCTGCCTTAGTACCATTGGGATATACAATATATTTTACTGGAATCCTCATGTATACAAAGCACTCTCTCCATATTATGCTTTCCAACTTTTAAGGAAAACTCAGAAAGGAGGTTGGATGGCCCTTGGTGGAATTTTGCTGTGCATTACAGGATCAGAAGCCATGTTTGCTGATCTTGGGCACTTTACACAATTATCAATCAAGATTGCTTTTACTTCTGTGGTTTATCCATCTTTAATTTTTGCATATATGGGGCAAGCTGCTTATCTATCTAAACATCATAACATTGAGCAAGATTATCACTTTGGGTTTTACGAATCTGTACCAGAGAAATTGAGATGGCCTGTTCTCGTTATAGCGATACTTGCTGCAGTTGTGGGAAGTCAAGCCATTATCACTGGAACATTCTCAATCATCAAGCAATGCTCCGCATTAAGTTGTTTCCCAAGAGTTAAAGTGATTCACACATCATCCAAAATTCATGGACAAATATATATCCCCGAGATCAATTGGCTATTGATGATATTGTGTTTGGTAGTAACTATTTGTTTCAGAGACACAAAGCATCTGGGTAATGCCTCAGGTTTGGCAGTTATCACAGTGATGCTGGTGACCACTTGTTTGATGTCACTGGTTATTGTACTTTGCTGGCACCAGAATGTTCTCCTTGCACTTGGGTTTGTTTTCATATTTGGCTACATTGAGGTTCTCTTCTTCTCTGCTTCTCTTATCAAGTTCCTGCAAGGAGCATGGGTGCCTATAGCATTGGCACTTGTGTTTCTGACTTGCATGTGTGCTTGGCACTATGGCACACTCAAAAAGTATGAATATGATGTTCAAAACAAGGTTTCCACCAACTGGCTACTCAGCCTATGTCCCGGCTTAGGTATTGTCCGAGTGCGTGGGGTTGGCCTTATACACACCGAGCTAGTGTCTGGAATCCCAGTAATCTTCTCCCACTTTGTAACCAATCTCCCAGCCTTCCATCAGGTCCTAGTTTTTCTATGCATCAAGCACGTGCCGGTTCCACATGTTACACCTGAGGAACGGTTTCTAGTTGGTCGCGTTGGTCCAAAAGAGTTCAGACTCTACCGGTGCATAGTGCGATATGGATACCGTGATGTCCACAGAGATGATGTTGAGTTTGAGAATGATCTTCTGTGCTGCATAGCAGAGTTCATACGCACAGAAAGAACTGGGTCGAACTCTTCAAATGATGAGCCCGTAAAGGATGACAGAATGGCAGTTGTAGGGACATGTTCTACACATTCCCTTTTGATGACTGAGAATAAAGTAGATAATGTGGAGAATGTAGACTTGCCAGGACCATCAGAACTAAAGGAGATAAAGTCACCCAATGTGATCCAGCAGCAGAAGAAAAGGGTAAGGTTTTTGGTACCAGAGAGTCCAAAGATTGACACAAGTGTAATGGAAGAGTTGGAGGAGGTGATGGAAGCCTGGGAGGCTGGGGTAGCTTACATTATAGGACAGACACACATGAGAGCAAAATCAGGGTCTAGCATGTTGAAGAAAATAGGCATTAATTTAGTGTATGAATTCCTTAGAAGAAATAGCAGGGCACCCTCCTTTGTTACTGGTGTGCCTCATGCATCATCTCTGGAAGTTGGGATGATGTACCAAGTTTAA 2367 0.4516 MRLTNTHAMDLEGGTTRRNSVKRESWRTVVTLAYQSLGVVYGDLSISPLYVFRSTFAEDIKHTESNEEVFGVLSLVFWTITLVPLLKYVFVVLKADDNGEGGTFALYSLLCRHARVSSLPNCQVADEELSEYRKDSRGAAPESSFAARLRSTFEKHKVLQRVLLVLALIGTCMVIGDGIFTPAISVFSAVSGLELSMSKEKHAYVEVPAACIILIGLFALQHYGTHRVGFLFAPVIITWLFCLSTIGIYNIFYWNPHVYKALSPYYAFQLLRKTQKGGWMALGGILLCITGSEAMFADLGHFTQLSIKIAFTSVVYPSLIFAYMGQAAYLSKHHNIEQDYHFGFYESVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALSCFPRVKVIHTSSKIHGQIYIPEINWLLMILCLVVTICFRDTKHLGNASGLAVITVMLVTTCLMSLVIVLCWHQNVLLALGFVFIFGYIEVLFFSASLIKFLQGAWVPIALALVFLTCMCAWHYGTLKKYEYDVQNKVSTNWLLSLCPGLGIVRVRGVGLIHTELVSGIPVIFSHFVTNLPAFHQVLVFLCIKHVPVPHVTPEERFLVGRVGPKEFRLYRCIVRYGYRDVHRDDVEFENDLLCCIAEFIRTERTGSNSSNDEPVKDDRMAVVGTCSTHSLLMTENKVDNVENVDLPGPSELKEIKSPNVIQQQKKRVRFLVPESPKIDTSVMEELEEVMEAWEAGVAYIIGQTHMRAKSGSSMLKKIGINLVYEFLRRNSRAPSFVTGVPHASSLEVGMMYQV* 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0282 788 Pfam K+ potassium transporter 34 614 IPR003855 GO:0015079|GO:0016020|GO:0071805
Gso1g0282 788 PANTHER POTASSIUM TRANSPORTER 6 9 788 - -
Gso1g0282 788 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 9 788 IPR003855 GO:0015079|GO:0016020|GO:0071805
Gso1g0282 788 TIGRFAM kup: potassium uptake protein 32 788 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0282 Gso-Chr1 3344465 3350386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0282 9 788 Inorganic Solute Cotransporters AT1G70300 73.410 0.0 1192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0282 K03549 - gmx:100793141 1556.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0282 1 3344465 3350386 Gso2g0280 2 3038344 3044104 GST
Gso1g0282 1 3344465 3350386 Gso18g1101 18 19953591 19959677 PCT