Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0258 ATGACGAATCAACAAGCAAACAACGTGGACAGATCTGCATCACTACCAAGTAAAAGGCACACCTACTGTTTCAAGGTATTTAAGTACAATCAGAAATCTTTGCTTCGCACCCTCTGTTCTACCTTCTACAAGAATCAGAAATCTTTTACGGTGGAAGTGTTCGAGGGAGAACGACTTAACACAAAGGATAACTTCTTTGTCAACAAGTTTCTCCTCTACGGGTTCCATCCATTACCAAAGGGAGTGCCACAAATCAACGCTATTTTTGATGTGGATGTCAATGACATTGTGGAGGTTCACCATGGAAGATACAAACATAGGAATAAAAAAGATCACAACCAACAACAAGCACAAAAGGCTGAACCCGGAAGAGATAAGAAGAATGGTGACAAACTAAAGTGGTACAAGGTAGAATACGAGGTGCCAAAGAAGAAGGTAAAGGTGAATTACGCTTATCAAATGAGGGAGAGTGCGAGCAAGATTGAAGAAGCAGTGGATGAAACGATAGACTGA 513 0.4094 MTNQQANNVDRSASLPSKRHTYCFKVFKYNQKSLLRTLCSTFYKNQKSFTVEVFEGERLNTKDNFFVNKFLLYGFHPLPKGVPQINAIFDVDVNDIVEVHHGRYKHRNKKDHNQQQAQKAEPGRDKKNGDKLKWYKVEYEVPKKKVKVNYAYQMRESASKIEEAVDETID* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0258 170 Pfam Hsp70 protein 38 164 IPR013126 GO:0005524|GO:0140662
Gso1g0258 170 PANTHER HEAT SHOCK PROTEIN 70KDA 37 169 IPR013126 GO:0005524|GO:0140662
Gso1g0258 170 MobiDBLite consensus disorder prediction 111 129 - -
Gso1g0258 170 PANTHER HEAT SHOCK 70 KDA PROTEIN 5 37 169 - -
Gso1g0258 170 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 38 109 IPR029047 -
Gso1g0258 170 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 6 169 IPR029047 -
Gso1g0258 170 MobiDBLite consensus disorder prediction 103 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0258 Gso-Chr1 3073871 3076102 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0258 40 170 Calmodulin-binding Proteins AT1G16030 36.364 1.40e-19 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0258 K03283 - gsj:114406410 333.954