Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso1g0255 | ATGGAGCATAGTAGTTTGGTTTTCTGGCTATTGGGGTTTCTGCTTCTGCTGTTGATGGAAATTTCTTCTGCTGCGCTTTCTCCTTCTGGCATAAACTATGAAGTTGTAGCTCTGATGGCCATAAAGAATGGCTTGATTGATCCTCACAATGTTCTGGAAAATTGGGATATTAATTCTGTTGATCCATGTAGCTGGAGGATGATTACTTGTTCCCCTGATGGTTCTGTTTCAGTATTGGGATTGCCTAGTCAGAACTTGTCTGGTACACTATCTCCTGGGATCGGAAACCTTACTAACTTACAATCTGTCTTGCTTCAGAATAATGCTATTTCTGGTAGAATTCCTGCTGCAATAGGAAGCTTGGAAAAGCTTCAGACACTCGATCTTTCCAATAATGCATTTAGTGGTGAGATACCCAGTTCTTTGGGAGGCCTCAAGAACCTGAATTATTTGAGGTTAAATAATAACAGCCTTACAGGATCCTGCCCTCAGTCGCTTAGCAACATTGAAGGTCTAACCCTTGTGGACCTCTCCTACAACAATCTGAGTGGTTCCTTGCCAAGAATATCAGCAAGAACTTTAAAGATCGTGGGTAACCCTTTAATTTGTGGCCCAAAAGCAAACAACTGTTCTACTGTTTTACCTGAGCCACTTTCCTTCCCTCCAGATGCTCTAAGAGGCCAATCAGACTCTGGTAAGAAAAGCCATCACGTGGCACTTGCTTTTGGTGCAAGTTTTGGTGCTGCTTTTGTCCTTGTGATTATAGTTGGGTTTCTTGTTTGGTGGCGGTATAGACGCAACCAGCAGATATTCTTTGATGTTAATGAACATTATGATCCAGAGGTGCGTCTTGGTCATTTAAAAAGGTTTTCATTCAAAGAGCTTCGAGCTGCAACAGACCATTTCAACTCGAAGAACATTCTAGGAAGAGGTGGCTTTGGAATAGTTTACAAGGCATGCTTGAATGATGGGTCTGTTGTGGCTGTCAAAAGGTTAAAGGACTATAATGCAGCTGGTGGTGAGATCCAATTTCAGACAGAAGTTGAGACCATAAGTTTGGCTGTCCACCGGAATCTTCTGCGGCTTTCGGGGTTTTGCAGTACTCAGCATGAAAGACTCCTTGTTTATCCCTATATGTCTAATGGCAGTGTAGCCTCTAGATTAAAAGATCATATTCATGGTCGGCCAGCTTTAGATTGGACGAGGCGAAAGAGAATAGCTTTAGGTACTGCAAGAGGGTTGGTTTACTTGCATGAGCAATGTGACCCTAAAATTATTCACCGTGATGTCAAAGCAGCCAACATATTGCTAGATGAAGACTTTGAAGCTGTTGTTGGTGATTTTGGTTTAGCTAAGCTTTTGGATCATAGAGATTCACATGTGACCACTGCTGTGCGTGGCACGGTTGGCCACATTGCTCCAGAGTACCTATCCACAGGCCAATCATCAGAAAAAACTGATGTGTTTGGGTTCGGAATCTTGCTGCTTGAACTGATCACAGGCCATAAGGCTCTAGATTTTGGGCGAGCAGCAAACCAGAAAGGTGTAATGCTTGATTGGGTTAAGAAGCTCCACCAGGATGGAAGATTGAGTCAAATGGTAGACAAAGATCTAAAGGGCAACTTTGATCTGATTGAATTAGAAGAAATGGTTCAGGTTGCACTCTTGTGTACACAATTCAATCCTTCACACCGCCCCAAGATGTCAGAAGTATTAAAGATGTTGGAAGGGGACGGCTTAGCTGAGAGATGGGAGGCCTCACAGAGGATTGAAACACCAAGGTTTCGGTCTTGTGAGCCTCAAAGATATTCAGATTTAATAGAGGAATCTTCACTCATAGTTGAAGCCATGGAGCTTTCTGGCCCTAGGTGA | 1872 | 0.4311 | MEHSSLVFWLLGFLLLLLMEISSAALSPSGINYEVVALMAIKNGLIDPHNVLENWDINSVDPCSWRMITCSPDGSVSVLGLPSQNLSGTLSPGIGNLTNLQSVLLQNNAISGRIPAAIGSLEKLQTLDLSNNAFSGEIPSSLGGLKNLNYLRLNNNSLTGSCPQSLSNIEGLTLVDLSYNNLSGSLPRISARTLKIVGNPLICGPKANNCSTVLPEPLSFPPDALRGQSDSGKKSHHVALAFGASFGAAFVLVIIVGFLVWWRYRRNQQIFFDVNEHYDPEVRLGHLKRFSFKELRAATDHFNSKNILGRGGFGIVYKACLNDGSVVAVKRLKDYNAAGGEIQFQTEVETISLAVHRNLLRLSGFCSTQHERLLVYPYMSNGSVASRLKDHIHGRPALDWTRRKRIALGTARGLVYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGHKALDFGRAANQKGVMLDWVKKLHQDGRLSQMVDKDLKGNFDLIELEEMVQVALLCTQFNPSHRPKMSEVLKMLEGDGLAERWEASQRIETPRFRSCEPQRYSDLIEESSLIVEAMELSGPR* | 624 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso1g0255 | 623 | Gene3D | Transferase(Phosphotransferase) domain 1 | 379 | 594 | - | - | |
Gso1g0255 | 623 | Pfam | Leucine rich repeat N-terminal domain | 32 | 71 | IPR013210 | - | |
Gso1g0255 | 623 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 425 | 437 | IPR008271 | GO:0004672|GO:0006468 | |
Gso1g0255 | 623 | SUPERFAMILY | L domain-like | 32 | 201 | - | - | |
Gso1g0255 | 623 | SMART | serkin_6 | 302 | 575 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso1g0255 | 623 | PANTHER | SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 | 6 | 623 | - | - | |
Gso1g0255 | 623 | Gene3D | Phosphorylase Kinase; domain 1 | 271 | 378 | - | - | |
Gso1g0255 | 623 | Gene3D | Ribonuclease Inhibitor | 31 | 212 | IPR032675 | - | |
Gso1g0255 | 623 | SUPERFAMILY | Protein kinase-like (PK-like) | 278 | 576 | IPR011009 | - | |
Gso1g0255 | 623 | ProSiteProfiles | Protein kinase domain profile. | 302 | 585 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso1g0255 | 623 | Pfam | Protein kinase domain | 303 | 573 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso1g0255 | 623 | ProSitePatterns | Protein kinases ATP-binding region signature. | 308 | 330 | IPR017441 | GO:0005524 | |
Gso1g0255 | 623 | PANTHER | PROTEIN NSP-INTERACTING KINASE 3 | 6 | 623 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso1g0255 | Gso-Chr1 | 3014833 | 3021170 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso1g0255 | 67 | 623 | Receptor kinase-like Gene Family | AT1G60800 | 77.193 | 0.0 | 834 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-II | Gso1g0255 | Pkinase | 2.7e-44 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso1g0255 | - | - | gmx:100806943 | 1196.03 |