Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0240 ATGAAAATGACACGGATCTTCCTTACGACCCTTTCATTGTGGCTCTTGGTCCTCGCTCCTTCCAAGGCCGAGGAGGGATTTCCCGACAAACTTCCATCAACATTTCATTCTCTATTTCCGTTTCTCGGTCGTCAAGATGACCTGAACAAGCCACAAAAGGGTCCTAATGACGAGTCTCAACAACAGAACGTGCCTCAACAAGCGGCTGACCAAAATCCTCAGATACTCAGCCAAGATTTCTACATAAAGACTTGCCCTAATGCACAAAAAATCGTGGCCGATGCACTTGCCAAGATTGTTAAGACCAATCCGGGCGCACTCGGAAACTTACTCCGCCTTCAATTCCATGACTGCTTCGTTAATGGATGCGATGCATCCATCTTGCTAGATTACTCGCCAAGTGGCGACGCTGTGGAGAAAAGTTCAATGGTCAATGGTCTACTCCTCAAAGGAGCTGATATGATCGATGAAATAAAGTTGAAGCTGGAGGAGCAGTGTCCTCAAACCGTGTCATGCGCTGACACATTGGCATTTACAGCCAACGAGGTAATGACCATGGCGGGTTTGGCCCCTCAGAAACCCCTCGGTGGCCGTAGAGACGCGCTCGTTTCCCTTGCAACCGCTGCAGAAACCGACAACATCCCTATGCCAAACTGGACCATGGAACAAATGGTAAAACTCTTCAACAAGAAGGGTTTCAACATCGAAGAAATGGTGATCCTACTCGGTGCACACTCGATCGGCATGGCTCATTGCGACTTGTTCATTGAAAGGGCATACAACTTCCAAAACACAGGGAAACCAGACCCTTCCCTTACTGTGGAAGTGCTTGAGGAATTAAGAAAGGCATGCCCTAATCTTAATACACCTAAGTACCGGAACCCCCCAGTGAACTTTGATGCAACACCAACTGTGCTTGATAACCTCTTCTACAAGGATATGGTGGAGAGAAAGAGAACTTTGCTCATTACGGATTCGCATATATTGGAAGATCCTAGGACTTTGCCAATTGTGCAACAGTTTGCACATGACGCTAGCTTGTTCCCCAGGAGATTTCCTGAGGTCATGCTTAAGATGAGTTCTTTGAATGTGCTCACAGGGAATGAAGGTGAGGTGAGGAAGATTTGTAGGTCCACCAATTAA 1143 0.4707 MKMTRIFLTTLSLWLLVLAPSKAEEGFPDKLPSTFHSLFPFLGRQDDLNKPQKGPNDESQQQNVPQQAADQNPQILSQDFYIKTCPNAQKIVADALAKIVKTNPGALGNLLRLQFHDCFVNGCDASILLDYSPSGDAVEKSSMVNGLLLKGADMIDEIKLKLEEQCPQTVSCADTLAFTANEVMTMAGLAPQKPLGGRRDALVSLATAAETDNIPMPNWTMEQMVKLFNKKGFNIEEMVILLGAHSIGMAHCDLFIERAYNFQNTGKPDPSLTVEVLEELRKACPNLNTPKYRNPPVNFDATPTVLDNLFYKDMVERKRTLLITDSHILEDPRTLPIVQQFAHDASLFPRRFPEVMLKMSSLNVLTGNEGEVRKICRSTN* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0240 380 Pfam Peroxidase 93 344 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso1g0240 380 PRINTS Haem peroxidase superfamily signature 107 121 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso1g0240 380 PRINTS Haem peroxidase superfamily signature 170 187 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso1g0240 380 PRINTS Haem peroxidase superfamily signature 237 252 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso1g0240 380 PRINTS Haem peroxidase superfamily signature 299 314 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso1g0240 380 MobiDBLite consensus disorder prediction 54 69 - -
Gso1g0240 380 ProSiteProfiles Plant heme peroxidase family profile. 75 380 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso1g0240 380 PANTHER PEROXIDASE 25-RELATED 27 378 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso1g0240 380 MobiDBLite consensus disorder prediction 46 69 - -
Gso1g0240 380 Gene3D Peroxidase, domain 2 215 359 - -
Gso1g0240 380 PANTHER PEROXIDASE 27 378 - -
Gso1g0240 380 Gene3D - 79 380 - -
Gso1g0240 380 ProSitePatterns Peroxidases proximal heme-ligand signature. 237 247 IPR019793 -
Gso1g0240 380 CDD secretory_peroxidase 76 379 IPR033905 GO:0004601|GO:0042744
Gso1g0240 380 PRINTS Plant peroxidase signature 85 104 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso1g0240 380 PRINTS Plant peroxidase signature 109 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso1g0240 380 PRINTS Plant peroxidase signature 150 163 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso1g0240 380 PRINTS Plant peroxidase signature 169 179 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso1g0240 380 PRINTS Plant peroxidase signature 236 248 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso1g0240 380 PRINTS Plant peroxidase signature 297 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso1g0240 380 PRINTS Plant peroxidase signature 354 367 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso1g0240 380 SUPERFAMILY Heme-dependent peroxidases 76 380 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0240 Gso-Chr1 2850562 2852695 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0240 76 380 Peroxidase AT4G08770 40.323 1.13e-69 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0240 K00430 - gmx:100802856 751.895