Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0231 ATGTTCGGACCAGCCCAATCCACTTCCGAACCTCCGAAATCCACTCTCAAATTCCTCTGTAGCTACGGCGGCAAAATCCTCCCTCGCTACCCCGACGGCAAGCTCCGCTACCTCGGCGGCCACACCCGCATCCTCGCCGTCGATCGCTCCATTCCATTCTCCGAGCTATTGCTGAAACTGGAGGAGCTCTGCGGCGCCTCCGTGAGGCACCTCCGCTGCCAATTACCCTCCGAAGACCTCGACGCTCTCGTCTCCATAACCTCCGACGAAGATCTCGCAAATCTCATCGAGGAATACAACCGTGTTTCGTCGCTGAAAATCAGAGCCTTCCTCTCGCCGCCCACGCCGCCGAGATCGCCGAACAAGTTTTCCACTGCTCCGTCGAAATCGGCGTCCATCTCCTCCTCCTCCGCTTCGTCATCGTCGTCGTCTTCATCGTATTACAGCCCTACCGGCTCCGGTGAATCTGGCCGGAGATACAGGGCTCCGGCGCTGGTTTCAGACTGCTGCGTACATCAGATGTCGCAGCCGCCGGCGTATCCGGTCGGCATGGAGAAATCGAAATCCTCCGGGAGGAATGTTCCTCTGCCGCGGTACGGTTACCACCACGGGAACGGTGGACACGTTTATCTGATCCACAACGGGAACCACTGGCAACAGCGTTACGGTGTCGTTTAG 678 0.5855 MFGPAQSTSEPPKSTLKFLCSYGGKILPRYPDGKLRYLGGHTRILAVDRSIPFSELLLKLEELCGASVRHLRCQLPSEDLDALVSITSDEDLANLIEEYNRVSSLKIRAFLSPPTPPRSPNKFSTAPSKSASISSSSASSSSSSSSYYSPTGSGESGRRYRAPALVSDCCVHQMSQPPAYPVGMEKSKSSGRNVPLPRYGYHHGNGGHVYLIHNGNHWQQRYGVV* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0231 225 MobiDBLite consensus disorder prediction 111 157 - -
Gso1g0231 225 Pfam PB1 domain 32 113 IPR000270 GO:0005515
Gso1g0231 225 MobiDBLite consensus disorder prediction 122 153 - -
Gso1g0231 225 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 8 218 - -
Gso1g0231 225 SUPERFAMILY CAD & PB1 domains 32 117 - -
Gso1g0231 225 SMART PB1_new 30 114 IPR000270 GO:0005515
Gso1g0231 225 PANTHER OS05G0427100 PROTEIN-RELATED 8 218 - -
Gso1g0231 225 Gene3D - 34 112 - -
Gso1g0231 225 CDD PB1_UP2 19 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0231 Gso-Chr1 2726377 2727924 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0231 16 225 MAP Kinase Kinase Kinase AT5G57610 33.929 8.59e-27 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0231 - - gmx:100810685 396.741