Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0221 ATGGCTCACAACTCAGACAGTGCCACCTCCAACCTTCTTCTCTGTTCGGAGAACAGCAGCACCTGCTTCGATGATGATTTGGAATGTTGTGATGCCGCAGATGGGTCCAACTCCAGAATCTCGCATCAGTTCTGGGACCACCATGAGGGTGGTGGTGGTGGTGGATCGGAGTTGTTGGCGTGTTTTGTGGCGCAGAGTGAGGAAACTGTGAGGGCTATGGTGGAGAGAGAGAGGGAGCATTTGCCGAGGGATGATTACTTGATGAGGCTGAGGAGTGGGGAGTTGGACTTGGGTGTTAGGAGGGAGGCTATTGATTGGATTTGTAAGGCTCATTCTTATTTTGGCTTTGGACCCTTGAGTTTTTGTTTAGCTGTGAACTACTTGGACCGCTTCCTATCGGTTTTTGATTTACCGAGAGGTGTGACTTGGACTGTGCAATTGTTAGCTGTAGCTTGCTTGTCGATTGCGGCTAAAATGGAGGAGATCAAAGTGCCTCAATCCGTAGATTTACAGGTTGGGGAACCAAAGTTTGTGTTTGAAGCTAGAACCATTCAAAAAATGGAACTACTTGTATTAAGCACATTGGGATGGAAAATGTGCGCTATAACTCCTTGTTCCTTCATAGACTACTTCCTTGGCAAGATCACTTGCGAGCAGCATCCAGCAAAATCATCCATTTCAATATCAGTGCAGCTCATCCTTGGCATAATCATGGGTATTGACTACTTGGAATTCCGGCCTTCTGAAATTGCTGCCGCGGTGGCTGTTTCTGTTTTAAAGGAATTGCAAGCGATAGAAATTGATAAGGCCATAATTGATCTCTTAGTAGTAGAGAAGTGGAGAGTTCTGAAGTGTGTTGAATTGATAAGAGATTTGTCCTTGATCAATGTTGCTGCTAGTTTAGGCAGCAAGGTACCATATGTGCCCCAAAGTCCAATTGGGGTGCTGGATGCTGGGTGCTTAAGTTATAAGAGTGATGAATTAACTGTTGGATCATGTCCAAATTCTTCACATAATATTTCAAATCCAAACCCTACTAAGAGGAGCAAACCAGATGGACCTTCTAATGGAACCTCCAATTCATGA 1086 0.4484 MAHNSDSATSNLLLCSENSSTCFDDDLECCDAADGSNSRISHQFWDHHEGGGGGGSELLACFVAQSEETVRAMVEREREHLPRDDYLMRLRSGELDLGVRREAIDWICKAHSYFGFGPLSFCLAVNYLDRFLSVFDLPRGVTWTVQLLAVACLSIAAKMEEIKVPQSVDLQVGEPKFVFEARTIQKMELLVLSTLGWKMCAITPCSFIDYFLGKITCEQHPAKSSISISVQLILGIIMGIDYLEFRPSEIAAAVAVSVLKELQAIEIDKAIIDLLVVEKWRVLKCVELIRDLSLINVAASLGSKVPYVPQSPIGVLDAGCLSYKSDELTVGSCPNSSHNISNPNPTKRSKPDGPSNGTSNS* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0221 361 Pfam Cyclin, N-terminal domain 70 200 IPR006671 -
Gso1g0221 361 SUPERFAMILY Cyclin-like 62 199 IPR036915 -
Gso1g0221 361 CDD CYCLIN 100 192 IPR013763 -
Gso1g0221 361 MobiDBLite consensus disorder prediction 332 361 - -
Gso1g0221 361 SMART cyclin_7 105 193 IPR013763 -
Gso1g0221 361 Gene3D - 83 200 - -
Gso1g0221 361 ProSitePatterns Cyclins signature. 100 131 IPR006671 -
Gso1g0221 361 Gene3D - 72 287 - -
Gso1g0221 361 PANTHER CYCLINS 1 342 IPR039361 -
Gso1g0221 361 Pfam Cyclin, C-terminal domain 202 293 IPR004367 -
Gso1g0221 361 PANTHER CYCLIN-D4-1-LIKE 1 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0221 Gso-Chr1 2547991 2550679 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0221 64 270 Core Cell Cycle Gene Families AT5G65420 60.766 1.06e-87 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0221 K18810 - gmx:100794010 699.893