Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0217 ATGGAACAAGGGATCTTCTCCGTGGCAGAATCAGTGGTATCTTCTGAAGCTATGGATCACGGTGGTGGCCAAATCTTCCATGCAGGGCCATCTGTAGAAGCATCAAGGATAACCACCTCTTCTAGATATGAGCCTTCTATGAGCAATGCCAGTTTCATGGAGACAGAGTGGACAGAGCTAGATGAACCTGGAGTGCACCTTGCAATCAGGCAATTAGCTGATGGAACAAGGGAGCTTCGCCGTATCAGATTCAAGTAA 258 0.4767 MEQGIFSVAESVVSSEAMDHGGGQIFHAGPSVEASRITTSSRYEPSMSNASFMETEWTELDEPGVHLAIRQLADGTRELRRIRFK* 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0217 85 PANTHER BREVIS RADIX-LIKE PROTEIN-RELATED 24 84 - -
Gso1g0217 85 PANTHER PROTEIN BREVIS RADIX-LIKE 1 24 84 IPR044532 -
Gso1g0217 85 ProSiteProfiles BRX domain profile. 55 85 IPR013591 -
Gso1g0217 85 Pfam Transcription factor regulating root and shoot growth via Pin3 54 84 IPR013591 -
Gso1g0217 85 MobiDBLite consensus disorder prediction 20 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0217 Gso-Chr1 2487380 2490082 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0217 19 84 Major Intrinsic Protein MIP AT1G31880 62.687 2.11e-22 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0217 - - gmx:102668295 161.384