Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0213 ATGGATCCGCTCAGAGGATCCGAACCCGAAAACCCTATTGCCACGTGTCTCTCCATGCTGTCCCTCCGCCGCTTCTCCGCGTGCCGCGACTTCGCCCGCCGCCTCCCCCCCTCCGACTCCGTCCCCCGCGTCCTAGCCGTCGCCGACGTCCTCTCCGCCGCCGACTTCTACTCCGTCCTACAGCTCCGCCCCTCCGACGGTGGCAACCGCGACCTCGCGCGGCGGCAGTACGCGAAGCTCGCGCTCCTCCTCGACCCAACGAACCCCGACAAGCTCCCGTTCTCCGACGAGGCCCTCGCACGTGTCCAGGATGCCTGGCACGTGCTCTCCCACCCCGAACGCCGCGCCCTCCACGACCGCGAGCAAAACGCAAACCTAAACCCGAACCCTATGACGGCGTCGTTTTGGACCGCGTGCCCCTACTGCTGGGGCCTCTTCGAGTACGAGAAGAGGTACGAGGATAGAGCGCTGCTGTGCCACGTCTGCGGGAAGGCCTTCCAGGGCGTGCCGGTGAAGCCGCCAACGAAGACGGGCGACGCCGTCATGGAGGGGGAGGAGCTCCGGCAGTACTACTCTTGTGAAGCTAGTGTGCCATTGATGTGTTACGAGGTTATGGGTAACAATGTATTGGGTGGACAAAATGCTGCACAATATGTCTACATTTCTGATGATAATGATAATAATGATGGAGGGTTTGTGAGAAATGAAGGGTTGCAAGGCAGTGGTGAGAAGAGGAGGATGAGGGTGAAGACCGTGGCGAACAAGGTTGCTGGGAACAGGACGAGAAGGCATCGATAG 798 0.6103 MDPLRGSEPENPIATCLSMLSLRRFSACRDFARRLPPSDSVPRVLAVADVLSAADFYSVLQLRPSDGGNRDLARRQYAKLALLLDPTNPDKLPFSDEALARVQDAWHVLSHPERRALHDREQNANLNPNPMTASFWTACPYCWGLFEYEKRYEDRALLCHVCGKAFQGVPVKPPTKTGDAVMEGEELRQYYSCEASVPLMCYEVMGNNVLGGQNAAQYVYISDDNDNNDGGFVRNEGLQGSGEKRRMRVKTVANKVAGNRTRRHR* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0213 265 Gene3D DnaJ domain 50 122 IPR036869 -
Gso1g0213 265 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 1 264 - -
Gso1g0213 265 SUPERFAMILY Chaperone J-domain 49 122 IPR036869 -
Gso1g0213 265 ProSiteProfiles dnaJ domain profile. 55 122 IPR001623 -
Gso1g0213 265 CDD DnaJ 55 110 IPR001623 -
Gso1g0213 265 Pfam DnaJ domain 55 119 IPR001623 -
Gso1g0213 265 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0213 Gso-Chr1 2446598 2447395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0213 7 218 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 29.675 7.08e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0213 - - gsj:114406356 544.273