Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0210 ATGGCGGAGCAGGGAAACCGTTGGAGCTGGGACGTCGCCGGCTTCGAGCCGTGGAAGTCGCCTTCGCCGGAGCAAAACGATCAGAAACCTACTGTGCCGTTGGCGAGGAGAAACTCCACCTCCTCCTTGGTTCCTCCGCATTCCGTGGCTTCCAAAGTTGAGGGATTAAGAGAAAAGGTTAAGCTTGCTAGAAACGACTACCTGCAGTTAAGACAAGAAGCAAGTGAACTTCAAGAATATTCAAATGCAAAACTTGACCGAGTTACACGATATCTTGGTGTTCTTGCTGAGAAAACCCACAAGTTAGATCAAGTTGCCCTTGAAACTGAGGCAAGAATGTCTTCTGTGATCAATGAGAAGAAGAAATTGTTCAATGACTTATTGACATCTAAAGGAAACATAAAGGTATTCTGCCGTACTAGGCCATTATTTGAAGATGAAGGTCCCTCAATTGTTGAATTCCCAGATGATTATACCATCCGTGTAAATACCGGAGATGAATCCTTGTCTAACTCCAAGAAAGAATTTGAATTTGACAGAGTTTATGGACCTCATGTTGGACAGGCTGACTTGTTCAGTGATGTTCAGCCAATGGTGCAATCAGCTTTGGATGGATATAATATTTCCTTATTTGCATATGGACAAACACATTCTGGAAAGACACACACTATGGAAGGATCAAGCTATGATAGGGGTTTATATGCTCGTTGTTTTGAGGAGCTGTTTGATTTGTCCAACTCGGACACAACTGCTACTTCTCAATATACATTCTGCATTACTGTTTTTGAGCTGTATAATGAACAGATAAGGGATCTGCTTTTGGAGTCAGGGAAAAGCTTGCCTAAACTGTGTTTTGGATCACCTGAATACTTCATAGAACTAATGCAGGAAAAAGTTGATAACCCTCTGGACTTTTCTAGGGTTTTGAAAGCTGCATTTCAGAGTCGAGGAAATAATCCATTAAAGATTAATGTTTCTCATTTGGTTGTTACAATACACATATTTTATAACAATTTGGTCACCGGTGAAAACTCATATAGCAAGCTCTCTTTGGTTGATTTGGCTGGAAGTGAATGTTTGATAACAGAAGATGATAGTGGTGAGCGTGTCACAGATATGCTTCATGTTATGAAGACACTTTCAGCGTTGGGAGATGTTTTATCTTCTTTGACATCAAAAAAGGATGCTATTCCTTATGAAAACTCGATGCTAACAAAACTATTTGCAGATTCACTTGGTGGAAGTTCAAAAACCCTGATGATTGTAAATGTGTGTCCAAATTCTTCAAATTTATCTGAGACATTACTGTCCCTCAATTTCTCTGCCAGAGCTCGAAATTCTGTATTAAGCCTCGGAAACCGAGATACAATTAAGAAGTGGAGAGATGTTGCAAATGATGCACGTAAGGAGTTATATGAGAAGGAAAAAGAAATCCAATATCTGAAACAAGACGGTCTGAGACTTAAGCAAGCACTTAAAGATGCAAATGATCAGTGTGCTCTACTCTTCAATGAAGTACAGAAGGCATGGAAAGTTTCTTCTGCACTGCAGACAGATTTAAAGTCAGAGCATATTTTGCTGGCCGATAATTATAAGGTAGAGAAAGAACAAAATGCTCAGCTTAGAAATCAAGTTGCTCATATGTTACAGTTAGAACAAGAGCAAAATTTGCTGATACAACAGCGTGATTCAACCATCCAAAGTTTGCAGGCTAAAATTGGAAGCCTTGAAATACAACTCAATGAAGCCCTTAAGTCCAGCAACACTGGGTCAAATGTTGGCCCAGAAACTCTGTCTGGAACTCTATCTAATCCCAGGACAACGGGGGATGGCACGGATTCGTCTGCAGTAACCAAGAAACTGGAAGAGGAACTCAAGAAACGCGATGCTCTGATTGAGAGGTTGCATGTAGAAAATGAGAAATTATTTGATAAATTGACTGAGAAAGCATCTCTGGCTGGATCACCTCAGCTGTCAAGTCCATTATCTGGGGGAGCAGTTAATGTTCAGCCTCAAAATAGGGGAAGGAATGGCACCAGCACCACTGCAAGAGCTCGTTCTCTGGATGTTCTTCCTTCTTCTTTGATGACAGATAAGAATGATGGCACTGTTGCTTTAGTTAAGTCTGATTCCGAGAAAGTTAAGATTACCCCTGCTGGTGAATATCTTACTGCTGCCCTGAATGACTTTAATCCTGATCAATATGAAGGACTCGCTGCCATTTCTGATGGTGCGAACAAGCTTTTGATGCTGGTTCTGGCTGCTGTCATCAAAGCCGGTGCCTCCAGAGAACATGAAATACTTGCTGAAATTAGAGATGCTGTTTTCTCATTTATTCGTAAAATGGAACCAAGGCGAGTAATGGATACCATGCTTGTTTCCCGTGTTAGAATCTTGTATATAAGATCTTTGCTTGCTAGATCCACAGAGTTGCAATCCATTAAGGTATTGCCAGTTGAGTGCTTTCTTGAAAAGGCCAACGCTGGACCCAGTAGAAGTTCTAGCCGAGCAAGCAGTCCTGGAAGATCTTCTATGCAATATGTTGATGAGCAGATCCAGGGATTTAAAGTGAGTCTAAAGCCAGAAAAGAAATCCAAATTTTCATCTGTTGTGTTGAAGATACGCGGGATTGATGAGGAAACCTGGAGACAGCAAGTAACTGGGGGAAAGCTTAGGGAAATTAGTGAGGAAGCAAAAAATTTTGCAATTGGAAACAAGGCTCTTGCTGCACTATTTGTACATACCCCAGCAGGAGAGCTGCAGCGCCAAATTAGATCCTGGCTTGCAGAGAAGTTTGATTTTCTATCTGTTATGGGAAATGATGCACCAGGGGGGACAACTGGTCAGTTGGAGCTTATTTCAACTGCAATTATGGATGGTTGGATGGCTGGACTTGGCAGTGCTCTGCCTCCCCAAACTGATGCCCTTGGCCAACTTTTATTTGAATATTCAAAACGTGTCTATACTTCTCAACTGCAGCACTTAAAGGATATTGTTGGTACCTTGGCAACAGAAGAAGCTGAAGATGCAGCACAAGTTGCGAAGTTGCGTTCAGCTCTAGAATCTGTTGATCACAAAAGAAGAAAGATTTTACAACAAATGAGAAGTGATGTAGCTTTGCTGACATTGGAAAATGGTAGTTCGCCTGTTCAAAATCCTTCTACTGCTGCTGAGGATGCACGATTAGCATCTCTCATTTCACTTGATAGAATATTGAAGCAAGTCAAGGAGGATATAACTCGACTTTCTACTGTGAACACCATCCAGAAAAGTAAGAAAGGAACAGTGCTCGGTTCTCTTGATAAACTAACAGAACAAATGCCTTCACTTCTTGAAATTGATCATCCATGTGCTCAGAGGTACATTGCAGATGCCCGCAGAAAAGTTGAGTCAATTCCTGAAGAAGATGACCGCATTCAAAATCTATCACATTCTCGCAAGCCATCAACGGATACAGGCTCTGGATCTGGAACTGATGTGGCACAGTGGAACGTCCTTCAATTCAATACGGGTAATACCTCACCATTTATAATTAAATGTGGAGCAAACTCAAATTCAGAACTAATCATTAAAGCCGAGGCTCGAGTTAAGGAACCTAAAGGCGGCGAGATTGTGAGGGTTGCCCCAAGGCCGTCCATTTTGGAAAATATGAGCTTGGAGGAAATGAAGCAAGTATTTGCTGAACTACCTGAGGCTCTAAGCTTGCTTGCCCTGGCAAGGACTGCAGATGGAACTCGAGCACGGTATTCTAGATTATATAGGACCTTGGCTATGAAGGTTCCGTCACTTAAAGATATGGTCAGTGAGCTTGAAAAAGGGGGTGCACTAAAAGATGTGAGAACATGA 3846 0.4171 MAEQGNRWSWDVAGFEPWKSPSPEQNDQKPTVPLARRNSTSSLVPPHSVASKVEGLREKVKLARNDYLQLRQEASELQEYSNAKLDRVTRYLGVLAEKTHKLDQVALETEARMSSVINEKKKLFNDLLTSKGNIKVFCRTRPLFEDEGPSIVEFPDDYTIRVNTGDESLSNSKKEFEFDRVYGPHVGQADLFSDVQPMVQSALDGYNISLFAYGQTHSGKTHTMEGSSYDRGLYARCFEELFDLSNSDTTATSQYTFCITVFELYNEQIRDLLLESGKSLPKLCFGSPEYFIELMQEKVDNPLDFSRVLKAAFQSRGNNPLKINVSHLVVTIHIFYNNLVTGENSYSKLSLVDLAGSECLITEDDSGERVTDMLHVMKTLSALGDVLSSLTSKKDAIPYENSMLTKLFADSLGGSSKTLMIVNVCPNSSNLSETLLSLNFSARARNSVLSLGNRDTIKKWRDVANDARKELYEKEKEIQYLKQDGLRLKQALKDANDQCALLFNEVQKAWKVSSALQTDLKSEHILLADNYKVEKEQNAQLRNQVAHMLQLEQEQNLLIQQRDSTIQSLQAKIGSLEIQLNEALKSSNTGSNVGPETLSGTLSNPRTTGDGTDSSAVTKKLEEELKKRDALIERLHVENEKLFDKLTEKASLAGSPQLSSPLSGGAVNVQPQNRGRNGTSTTARARSLDVLPSSLMTDKNDGTVALVKSDSEKVKITPAGEYLTAALNDFNPDQYEGLAAISDGANKLLMLVLAAVIKAGASREHEILAEIRDAVFSFIRKMEPRRVMDTMLVSRVRILYIRSLLARSTELQSIKVLPVECFLEKANAGPSRSSSRASSPGRSSMQYVDEQIQGFKVSLKPEKKSKFSSVVLKIRGIDEETWRQQVTGGKLREISEEAKNFAIGNKALAALFVHTPAGELQRQIRSWLAEKFDFLSVMGNDAPGGTTGQLELISTAIMDGWMAGLGSALPPQTDALGQLLFEYSKRVYTSQLQHLKDIVGTLATEEAEDAAQVAKLRSALESVDHKRRKILQQMRSDVALLTLENGSSPVQNPSTAAEDARLASLISLDRILKQVKEDITRLSTVNTIQKSKKGTVLGSLDKLTEQMPSLLEIDHPCAQRYIADARRKVESIPEEDDRIQNLSHSRKPSTDTGSGSGTDVAQWNVLQFNTGNTSPFIIKCGANSNSELIIKAEARVKEPKGGEIVRVAPRPSILENMSLEEMKQVFAELPEALSLLALARTADGTRARYSRLYRTLAMKVPSLKDMVSELEKGGALKDVRT* 1282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0210 1281 Pfam Kinesin motor domain 139 446 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso1g0210 1281 ProSiteProfiles Kinesin motor domain profile. 133 447 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso1g0210 1281 PANTHER KINESIN-LIKE PROTEIN KLP-3 2 1257 - -
Gso1g0210 1281 PANTHER KINESIN-LIKE PROTEIN KIN-14A-RELATED 2 1257 IPR030109 GO:0008017|GO:0009904
Gso1g0210 1281 Gene3D Kinesin motor domain 78 447 IPR036961 -
Gso1g0210 1281 Coils Coil 621 641 - -
Gso1g0210 1281 MobiDBLite consensus disorder prediction 586 618 - -
Gso1g0210 1281 Coils Coil 457 484 - -
Gso1g0210 1281 PRINTS Kinesin heavy chain signature 205 226 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso1g0210 1281 PRINTS Kinesin heavy chain signature 348 366 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso1g0210 1281 PRINTS Kinesin heavy chain signature 397 418 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso1g0210 1281 MobiDBLite consensus disorder prediction 1 50 - -
Gso1g0210 1281 SMART kinesin_4 131 455 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso1g0210 1281 Coils Coil 566 586 - -
Gso1g0210 1281 MobiDBLite consensus disorder prediction 653 681 - -
Gso1g0210 1281 MobiDBLite consensus disorder prediction 1129 1158 - -
Gso1g0210 1281 MobiDBLite consensus disorder prediction 586 615 - -
Gso1g0210 1281 ProSitePatterns Kinesin motor domain signature. 347 358 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gso1g0210 1281 MobiDBLite consensus disorder prediction 21 47 - -
Gso1g0210 1281 MobiDBLite consensus disorder prediction 1129 1144 - -
Gso1g0210 1281 Coils Coil 53 80 - -
Gso1g0210 1281 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 133 482 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0210 Gso-Chr1 2400926 2422435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0210 120 448 Calmodulin-binding Proteins AT5G65930 35.569 6.07e-50 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0210 - - gmx:100790504 2417.88