Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0189 ATGGATCCGACTCAATCGAACGACGTTCAGCAATACCCACAAACCCTAATCTCAGAGCCTAAAGATTCTCCAATGCACGACGCCAACGAGTCCTTGTTCGATTCGATGGTTTGCGACTCCAGTTCAAGACTGGTCCCAACTGGGCTTACGAGATCTGGCAACGCAGAAGAGGAGTGTTTCATGTTTGTAAATGCGGGAGGGGATGCTTTTAGTGAAGCAGCTGGTGGAATAACGTTCCTGGGTGACACCTATTTTGATGGTGGCAACGTTATGCGTACCAATGAGAAAATAGTGGAGGGTGGAGACTACCCATTTATCTACCAATCAGCTCGGTTGGGAAGCTTTTGTTATAGGTTTGCTAATCTTCCTCCTGGAGACTACGTTGTTGATCTTCATTTTGTGGAGATCATTAACATAAATGGGCCAAAAGGAATGAGGGTGTTCAATGTATACATCCAAGATGAAAAGGTTCTATCTGAATTGGATATCTATGCAGTTGTTGGAGCCAATAAGCCATTACAGATGGTTGATTCAAGGGTGTCTGTTAAGGATGATGGGGTTATTCTCATAAGATTTGAAAGTATATCTGGAAGCCCAGTTGTTAGTGGGATTTGCATTAGAAGAGCAACGAAGGCGTCAGTTCCACAAGTGACAAGTGATTACATTAAATGTAGCTCCTGTGCTGCACAGATTGAAATTCCTTCATCACAGATGAAAGTTATGCAGGCAAAGTCTACAGCAAAGTACAAGAGCAAGATAAAAGAGCTCACAATGCAGTGCGATCTCAAGGCAAAAGAATGCTATGAGGCATGGATGTCATTAACAGCAAAAAATGAGCAATTGGAGGCAGTCCAGATGGAACTTGACAAAGTGACATTTAAGTTACTCACAACTGATCAAACTGTAGAGAAACAAGCTGAAAGCCTGAGGAGTATTTCTAATAGGTATGAGCTTGATAAGAAGAAATGGGCAGAAGCAATTAACAGTTTACAAGAAAAAATTAAGTTGATGAAGAGTGATTATTCAAAACTTTCCTTTGAAGCGCATGAATGTGTTGATTCAATCCCCGAATTAAATAAGATGGTTTTTGCAGTTCAGGAATTGGTTAAGCAGTGTGAAGATCTCAAAGTGAAGTACAGCGAAGAGATGGCAAAGAGAAAGAAACTCTTCAATGAAGTTCAAGAGGCTAAAGGGAACATTAGGGTTTTCTGTCGATGTCGTCCATTGAATAAGGCTGAAATCTCAGCTGGAAGCAATACAGTTGTGGATTTTGATGCAGCAAAGGAAGGTTGCCTTGGAATTTTGACAAGTGGCTCCACCAAAAAATCATTCAGATTTGACAGAGTTTATACACCAAAAGATGATCAAGTTGATGTTTTTGCTGATGCATCATCAATGGTAATCTCTGTACTGGATGGCTACAATGTTTGCATCTTTGCTTATGGGCAAACAGGAACAGGGAAGACATTCACCATGGAAGGAACACAGCAGAATAGAGGAGTAAATTACAGGACTCTTGAGCACTTGTTTAAAGTTAGTAAGGAAAGGAGTGAAACATTTTCATATGACATATCTGTTAGTGTGATAGAGGTTTACAATGAACAAATCAGAGACTTATTGGCTACAGGACAAACATCAAAGCGGTTGGAGATAAAACAAGCTTCTGAAGGATTTCATCATGTTCCTGGTGTTGTAGAAGCCAGGATTGATAACATAAATGAAGTGTGGAATGTACTGCAGGTCGGAAATAATGCTAGAGCAGTTGGAAGTAATAACGTTAATGAGCACAGCAGTCGATCTCACTGCCTGCTTTGTGTAACAGTAAAGGCTAAAAATTTGTTGAGTGGCGAATCTACCAAGAGCAAGCTTTGGCTTGTGGATTTGGCAGGTAGTGAGAGACTTGCAAAGACTGATGTGCAAGGGGAACGGCTTAAGGAAGCACAAAATATCAATCGATCTCTTTCTGCCCTTGGAGATGTAATATCCGCTTTAGCAGCGAAAAGTAGTCACATTCCATATAGGAACTCTAAACTGACACATTTACTTCAAGACTCACTAGGAGGTGACTCCAAAACTTTGATGTTTGTACAAATAAGTCCATCAGACCAGGACGTAGGTGAGACACTGAGCTCACTTAATTTTGCAACTAGAGTGAGGGGTGTTGAGTTAGGTCCTGTTAAGAAGCAAATTGATACAAGTGAAGTTCAAAAGATGAAAGCAATGCTTGAAAAAGCACGGAGTGAGTGCAGAATTAAAGATGAATCTATGCGAAAACTTGAAGAAAATTTGCAAAGCTTGGAGAGTAAGGCCAAAGGCAAGGATCAAATTTACAAAAATCTACAAGAAAAGATTCAAGAACTTGAGGGACAGATTGAGTTGAAAAGAGCCATGCAAAATGACTCAGAGAAAAAAATCTCTCAATTATCTGCCAAATTGAGAGGGAAAGAAGAAACCTGCGGTACTCTTCAACAAAAGGTGAAAGAGCTAGAGAAAAAGATGAAAGAACAACTGCAGTCAGAGTCAGCAAGTTTTCAACAGAAGGTTTGGGATCTAGAGAAAAAACTGGAAGATCAGATGCAAGGGTCTGAGTCTGAATCTGCCATTTTGAAAGATAAGATCAAGGAGCTTGAGAGAAAACTGAAAGAGCAGGAACAAAGCTCAATGTCCTTGCTTCGTCAACAGATGAAGGAACTGGAGGACAGGTACCGAGAGCGAGAGCAACAATGGCAACAAACTCATTCTTTTGTGGATGCAGTAAAAGCAGCCACACCAGATGTATGTAAAAGCTGCATGGGGGAAGAATGTCCAAGTGAGATCGAGACTGGCATTTTAAGGTGTTCAGACTCGGTAAACCGCCAGATAAGTCAAGGTTCTTCTTTGTTCAAAGGGAATGATTCCACTCATAAGATAAGCCAAGGTTCTTTGTTCAAAGAGAATGATTCCACTCATAAGATAAGAAGCAAAAGAAGCAATGATGAAAACAACTTTGTCATGCCATCATCATTATTACATGATAGAAGAGTCGCAAGGAAATCTGATCCACCAAAAATAGTAAGGGGTGTGAGGCCAACACCAAGGCCAGTCACTGCTAATCCAGCCCCAGTGTCTCACAAGAGAGGTAGCACAAGCAGAGATCAGGTTCAAGGAATCAAAGAGAGGGACACTAAGAAGAAAATTTGGTCAAGATAG 3189 0.4077 MDPTQSNDVQQYPQTLISEPKDSPMHDANESLFDSMVCDSSSRLVPTGLTRSGNAEEECFMFVNAGGDAFSEAAGGITFLGDTYFDGGNVMRTNEKIVEGGDYPFIYQSARLGSFCYRFANLPPGDYVVDLHFVEIININGPKGMRVFNVYIQDEKVLSELDIYAVVGANKPLQMVDSRVSVKDDGVILIRFESISGSPVVSGICIRRATKASVPQVTSDYIKCSSCAAQIEIPSSQMKVMQAKSTAKYKSKIKELTMQCDLKAKECYEAWMSLTAKNEQLEAVQMELDKVTFKLLTTDQTVEKQAESLRSISNRYELDKKKWAEAINSLQEKIKLMKSDYSKLSFEAHECVDSIPELNKMVFAVQELVKQCEDLKVKYSEEMAKRKKLFNEVQEAKGNIRVFCRCRPLNKAEISAGSNTVVDFDAAKEGCLGILTSGSTKKSFRFDRVYTPKDDQVDVFADASSMVISVLDGYNVCIFAYGQTGTGKTFTMEGTQQNRGVNYRTLEHLFKVSKERSETFSYDISVSVIEVYNEQIRDLLATGQTSKRLEIKQASEGFHHVPGVVEARIDNINEVWNVLQVGNNARAVGSNNVNEHSSRSHCLLCVTVKAKNLLSGESTKSKLWLVDLAGSERLAKTDVQGERLKEAQNINRSLSALGDVISALAAKSSHIPYRNSKLTHLLQDSLGGDSKTLMFVQISPSDQDVGETLSSLNFATRVRGVELGPVKKQIDTSEVQKMKAMLEKARSECRIKDESMRKLEENLQSLESKAKGKDQIYKNLQEKIQELEGQIELKRAMQNDSEKKISQLSAKLRGKEETCGTLQQKVKELEKKMKEQLQSESASFQQKVWDLEKKLEDQMQGSESESAILKDKIKELERKLKEQEQSSMSLLRQQMKELEDRYREREQQWQQTHSFVDAVKAATPDVCKSCMGEECPSEIETGILRCSDSVNRQISQGSSLFKGNDSTHKISQGSLFKENDSTHKIRSKRSNDENNFVMPSSLLHDRRVARKSDPPKIVRGVRPTPRPVTANPAPVSHKRGSTSRDQVQGIKERDTKKKIWSR* 1063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0189 1062 ProSitePatterns Kinesin motor domain signature. 621 632 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gso1g0189 1062 MobiDBLite consensus disorder prediction 1 25 - -
Gso1g0189 1062 MobiDBLite consensus disorder prediction 957 978 - -
Gso1g0189 1062 MobiDBLite consensus disorder prediction 1044 1062 - -
Gso1g0189 1062 Coils Coil 812 908 - -
Gso1g0189 1062 Pfam Malectin domain 62 204 IPR021720 -
Gso1g0189 1062 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 399 757 IPR027417 -
Gso1g0189 1062 SMART kinesin_4 397 729 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso1g0189 1062 Coils Coil 313 340 - -
Gso1g0189 1062 MobiDBLite consensus disorder prediction 1 18 - -
Gso1g0189 1062 ProSiteProfiles Kinesin motor domain profile. 399 721 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso1g0189 1062 Gene3D - 55 212 - -
Gso1g0189 1062 SUPERFAMILY Tropomyosin 727 914 - -
Gso1g0189 1062 PANTHER KINESIN-LIKE PROTEIN KLP-3 27 1050 - -
Gso1g0189 1062 Gene3D Kinesin motor domain 344 723 IPR036961 -
Gso1g0189 1062 Coils Coil 365 385 - -
Gso1g0189 1062 PRINTS Kinesin heavy chain signature 473 494 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso1g0189 1062 PRINTS Kinesin heavy chain signature 591 608 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso1g0189 1062 PRINTS Kinesin heavy chain signature 622 640 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso1g0189 1062 PRINTS Kinesin heavy chain signature 671 692 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso1g0189 1062 Pfam Kinesin motor domain 405 720 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso1g0189 1062 Coils Coil 742 804 - -
Gso1g0189 1062 CDD KISc_C_terminal 397 723 - -
Gso1g0189 1062 PANTHER KINESIN-LIKE PROTEIN KIN-14R 27 1050 - -
Gso1g0189 1062 MobiDBLite consensus disorder prediction 957 1062 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0189 Gso-Chr1 2161559 2167939 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0189 371 775 Calmodulin-binding Proteins AT5G65930 40.640 2.55e-85 299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0189 1 2161559 2167939 Gso9g1658 9 40906595 40913108 GST