Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0179 ATGATGGAGTTACCAGATATTTGGATATTAAGACTGGTTGTGGCATGTGTTTTTTGTCTGCTTATATTTATCAGATCGGCTTCTGGCTCTGCAACTGAAGGCTTTGAAAACATAGCATGCTGTGCTGATTCAAACTACACAGATCCCCAAACCACCTTAAATTACACAACAGATTACAGATGGTTCCCTGATAAAGGAAGTTGCAGAAGAACTAAAGATGTGTTAAATGAAAAAGTTCGACTGTTTTTTGTAGATGAAGGAAAGAGATGTTACAACTTGCCAACAATTAAGAATAAAGTATATCTGATAAGGGGCACATTTCCATTCAACGGTGTAAATTCTTCCTTTAATGTCTCAATTGGGGTAACACAGTTAGGTGCAGTGAGATCATCCGGGCTCCAGGACTTGGAAATTGAGGGAATTTTCAGAGCTACCAAAGACTACATAGACTTCTGCTTAGTGAAGGGGGAGGTGGATCCCTTTATTTCTCAACTTGAATTAAGGCCATTGCCTGAAGAGTATCTACATGATTTGCCTGCCAGTGTTTTAAAACTGATAAGCAGAAATAGTTTTTGGGGCACAAAAGATGAAATAAGGTTCCCAACCGACCCAAGTGATAGAATCTGGAAAGCAACTTCAAGTTCATTATCTGCTCTTCTATTGTCTTCCAATGTCAGCAATTTTGACCTCAAATCCAATGTGACACCACCTCTACAAGTCCTCCAAACAGCTGTTACCCACCCTGACCGATTACAGTTCGTCCTCAGTGGCCTTGACATTGAGGATAATGAATATCGTGTATTTCTCTACTTCCTAGAATTAAATAGCACTGTCAAAGCAGGCAAAAGGGTGTTTGACATCTATGTTAATGGTGAGATTAAAAAGGAGAGATTTGATATATTGGCTGGAGGGTCCAACTACACATACACTGTCTTGAATGTTTCAGCAAATGGATTACTTAATCTAACCTTGGTCAAGGCCTCTGGAGCTGAGTTTGGACCCCTTTTGAATGCTTATGAGGTCCTGCAGATGCGATCATGGATTGAAGAGACCAACCAAAAGGATGTGGAAGGGATTCAGAAGATTAGAGAAGAATTGCTGTTGCAAAACCAAGACAATAAAGCACTAGAGAGTTGGACTGGAGACCCTTGTTTTTTCCCCTGGCAAGGAATAACATGTGACGGTTCAAATGGTTCGTCTGTTATCACTAAGCTGGATCTGTCTGCACGAAATTTCAAAGGACAAATTCCTTCCAGTATCACTGAGATGACCAACTTAAAACTACTAAACCTGAGCCACAACGATTTCAATGGTTATATCCCCTCGTTTCCACTGTCCTCCCTGTTGATATCAATAGATTTGAGCTACAATGATCTTATGGGATCACTTCCAGAATCAATCGTCTCACTGCCACATCTAAAATCGTTGTATTTTGGCTGCAACAAACGCATGAGCAAAGAGGATCCAGCAAATTTGAACAGTTCACCAATCAATACTGACTATGGAAGATGCAAAGGAAAAGAACCTAGATTTGGACAAGTATTCGTCATTGGTGCTATTACATGTGGATCACTTTTGATTACTTTGGCCGTTGGAATCATTTTTGTTTGCCGCTATAGACAAAAGTTGATTCCATGGGAAGGATTTGGTGGAAAGAACTACTTAATGGAAACAAATGTAATATTCTCTTTGCCAAGCAAAGATGATTTCTTAATAAAGTCTGTATCAATTCAAACATTCACTTTGGAAGATATAGAGGTGGCCACAGAAAGGTACAAAACTTTGATTGGAGAAGGAGGATTTGGTTCTGTTTACCGTGGCACTCTAAACGACGGTCAAGAAGTGGCAGTGAAAGTCCGGTCAGCCACATCAACTCAGGGAACTCGAGAATTTGATAATGAGCTAAACCTACTTTCTGCAATACAGCATGAGAACCTGGTGCCTCTTCTTGGTTACTGTAACGAAAATGATCAACAAATTCTCATGTATCCTTTCATGTCCAATGGTTCTTTGCAAGATAGACTCTATGGGGAACCTGCAAAGAGAAAAATATTAGACTGGCCAACTAGACTGTCTATTGCTCTTGGTGCGGCACGAGGTTTGGCATATCTTCATACATTTCCAGGACGTTCAGTAATACACAGGGACGTGAAATCAAGCAATATACTTCTAGATCATAGCATGTGTGCTAAGGTTGCCGATTTTGGTTTCTCAAAATATGCTCCTCAGGAAGGAGACAGTAATGTTTCCCTTGAAGTAAGAGGAACTGCAGGGTACCTGGATCCTGAGTACTACAAAACCCAGCAATTGTCTGAGAAGAGTGATGTTTTCAGCTTTGGCGTGGTTTTACTTGAAATTGTGAGCGGCAGGGAACCTCTCGACATAAAGAGGCCACGGAACGAGTGGAGCTTGGTTGAATGGGCTAAGCCATACATTAGAGTATCAAAGATGGATGAAATTGTGGATCCTGGCATCAAGGGAGGATACCATGCAGAGGCAATGTGGAGAGTAGTGGAAGTAGCCCTGCAATGTCTTGAACCCTTCTCAGCATATAGACCAAACATGGTTGACATTGTCCGGGAGTTAGAGGATGCTCTCATCATAGAAAACAATGCATCAGAATACATGAAGTCAATAGACAGCCTTGGAGGATCCAACCGCTACTCTATTGTCATAGAGAAAAGGGTGCTGCCCTCAACTTCATCAACAGCAGAATCAACCATCACAACCCAAGCCTTGTCCCACCCACAGCCAAGATAG 2760 0.4138 MMELPDIWILRLVVACVFCLLIFIRSASGSATEGFENIACCADSNYTDPQTTLNYTTDYRWFPDKGSCRRTKDVLNEKVRLFFVDEGKRCYNLPTIKNKVYLIRGTFPFNGVNSSFNVSIGVTQLGAVRSSGLQDLEIEGIFRATKDYIDFCLVKGEVDPFISQLELRPLPEEYLHDLPASVLKLISRNSFWGTKDEIRFPTDPSDRIWKATSSSLSALLLSSNVSNFDLKSNVTPPLQVLQTAVTHPDRLQFVLSGLDIEDNEYRVFLYFLELNSTVKAGKRVFDIYVNGEIKKERFDILAGGSNYTYTVLNVSANGLLNLTLVKASGAEFGPLLNAYEVLQMRSWIEETNQKDVEGIQKIREELLLQNQDNKALESWTGDPCFFPWQGITCDGSNGSSVITKLDLSARNFKGQIPSSITEMTNLKLLNLSHNDFNGYIPSFPLSSLLISIDLSYNDLMGSLPESIVSLPHLKSLYFGCNKRMSKEDPANLNSSPINTDYGRCKGKEPRFGQVFVIGAITCGSLLITLAVGIIFVCRYRQKLIPWEGFGGKNYLMETNVIFSLPSKDDFLIKSVSIQTFTLEDIEVATERYKTLIGEGGFGSVYRGTLNDGQEVAVKVRSATSTQGTREFDNELNLLSAIQHENLVPLLGYCNENDQQILMYPFMSNGSLQDRLYGEPAKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSNVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLDIKRPRNEWSLVEWAKPYIRVSKMDEIVDPGIKGGYHAEAMWRVVEVALQCLEPFSAYRPNMVDIVRELEDALIIENNASEYMKSIDSLGGSNRYSIVIEKRVLPSTSSTAESTITTQALSHPQPR* 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0179 919 Pfam Protein tyrosine and serine/threonine kinase 594 862 IPR001245 GO:0004672|GO:0006468
Gso1g0179 919 SUPERFAMILY L domain-like 374 491 - -
Gso1g0179 919 SMART serkin_6 590 867 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso1g0179 919 Gene3D Transferase(Phosphotransferase) domain 1 666 879 - -
Gso1g0179 919 ProSitePatterns Protein kinases ATP-binding region signature. 596 618 IPR017441 GO:0005524
Gso1g0179 919 Gene3D Ribonuclease Inhibitor 358 499 IPR032675 -
Gso1g0179 919 Pfam Leucine rich repeat N-terminal domain 354 394 IPR013210 -
Gso1g0179 919 Gene3D Phosphorylase Kinase; domain 1 562 665 - -
Gso1g0179 919 PANTHER OS07G0107800 PROTEIN-RELATED 82 880 - -
Gso1g0179 919 SUPERFAMILY Protein kinase-like (PK-like) 571 862 IPR011009 -
Gso1g0179 919 CDD STKc_IRAK 596 863 - -
Gso1g0179 919 Gene3D - 195 345 - -
Gso1g0179 919 PANTHER OS05G0525400 PROTEIN 82 880 - -
Gso1g0179 919 ProSiteProfiles Protein kinase domain profile. 590 867 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso1g0179 919 Pfam Malectin-like domain 42 343 IPR024788 -
Gso1g0179 919 ProSitePatterns Serine/Threonine protein kinases active-site signature. 712 724 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0179 Gso-Chr1 2023564 2032095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0179 9 869 Receptor kinase-like Gene Family AT1G67720 34.257 6.63e-133 420
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Gso1g0179 Malectin_like 2e-45 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0179 - - gmx:100781986 1810.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0179 1 2023564 2032095 Gso9g1669 9 41034868 41043297 GST