Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0154 ATGGCAATTGAAAACCAAGACACCGCTGTCAGAGAAATCAAGCCCAAGAACAGGAGAATCATGGGTGCTGGAGGGCCTGATGATGAGGACAATAGGTGGCCACCGTGGTTGAAGCCACTGCTGAAAGAGAGCTTCTTTGTTCAATGCAAGTTGCATGCTGATTCTCACAAGAGCGAATGCAACATGTATTGCTTGGACTGTATGAATGGCCCTCTCTGCTCTCTCTGCCTCGCCCACCACAAAGATCACCGTGCAATCCAGATTAGGAGGTCCTCATACCATGATGTGATCAGGGTCTCTGAGATTCAGAAGGTGTTGGACATCACTGGTGTCCAAACCTACATTATCAACAGCGCAAGGGTGGTGTTTTTGAACGAGAGGCCTCAACCAAGGCCTGGAAAAGGTGTCACAAACACTTGTGAAGTCTGCGAGCGTAGCCTTCTTGATTCTTTCCGCTTCTGTTCTCTTGGTTGCAAGATTGTTGGAACATCTAAGAACTTCCAGAAGAGGAAGAAGCAGTCAATGGCAATGTCATCAGATTCTGAGGACTCGTACAGCAGCAACAGCGTCCATGGTCTTAAGAAAAACTGCAAAGTCCAGAGCTTCACACCATCCACACCACCCCCAACTTCGGTTAATTACAGAACGGCCAAGAGAAGAAAGGGAATACCACACCGTGCCCCAATGGTGGGACTAATCATAGAATATTAG 711 0.4782 MAIENQDTAVREIKPKNRRIMGAGGPDDEDNRWPPWLKPLLKESFFVQCKLHADSHKSECNMYCLDCMNGPLCSLCLAHHKDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSFRFCSLGCKIVGTSKNFQKRKKQSMAMSSDSEDSYSSNSVHGLKKNCKVQSFTPSTPPPTSVNYRTAKRRKGIPHRAPMVGLIIEY* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0154 236 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 9 232 - -
Gso1g0154 236 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 9 232 - -
Gso1g0154 236 Pfam PLATZ transcription factor 89 160 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0154 Gso-Chr1 1725406 1727794 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Gso1g0154 PLATZ 4.6e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0154 - - gmx:100797900 471.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0154 1 1725406 1727794 Gso1g0154 1 1725406 1727794 ECH