Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0150 ATGCAAACGACCAAGTACGATGTCTTCGCCAGACTCAAAGCAAACTACTCCGAAACCGTACTTCCGCCACCACCGCCACCGCCACAAATCACCCCGTCGACGCTAATATCCTTCACCGTGGTGGTGGCGGTGGTCTGCTTCGTGGGTTTCAGTATTCTCTGCTTCTTCAGGTGCTGTTTCGTGAACATAAGCTCCACCACCCTCGTTCATCTTTCTCCCAATGCTTCTCCCTTCAGAGGCCTCGACCCTTCACAGCTGCAAGCGTTCCCCACGTTCCTCTACGCCACCGTGAAGGATCTCCGCAAGGAGAAGAATCAGTATTCATTAGAATGCGCCATTTGCTTGTTGGAGTTCGACCATGACAGCATGCTGAGACTCTTAACCGTTTGCTACCATGTTTTCCACCAAGAGTGCATCGATTTGTGGCTAAGGTCACATAAGACTTGCCCCGTTTGTCGCACGGATCTTGATCAGTCACCATTGATCACAAACAAATCTCCAGAACACCAAAACGTGGACAATATTGTAGAACAAGAGATCAGCACAGATCATCATCACGTGTGCATTGATGTAAAAGAAGGTGATGATAGTGAGGGCATGCAGGAACAGAAGATTGAATTTGCACGTTCACACTCAACGGGACATTCCATAGTTATGGTTAGAGGAGAAGGGAGACATGCTGATAAATATACGTTGAGATTGCCGGAGAATGTGGCGTTCAAAATTGTAAAAGGAGGGCACAACTACTCCAAGAGTTGTTCTAGTTCCAAAGATATGGCAAGGCTTGCTGCGCCTTGCAGGAATTGTGGTTATGTTCAAACTGTATTTCAAAGTTCCTCATCCCGTAGTGATATAAAAAATATTTAA 867 0.466 MQTTKYDVFARLKANYSETVLPPPPPPPQITPSTLISFTVVVAVVCFVGFSILCFFRCCFVNISSTTLVHLSPNASPFRGLDPSQLQAFPTFLYATVKDLRKEKNQYSLECAICLLEFDHDSMLRLLTVCYHVFHQECIDLWLRSHKTCPVCRTDLDQSPLITNKSPEHQNVDNIVEQEISTDHHHVCIDVKEGDDSEGMQEQKIEFARSHSTGHSIVMVRGEGRHADKYTLRLPENVAFKIVKGGHNYSKSCSSSKDMARLAAPCRNCGYVQTVFQSSSSRSDIKNI* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0150 288 PANTHER RING-H2 FINGER PROTEIN ATL29 20 260 - -
Gso1g0150 288 SUPERFAMILY RING/U-box 110 159 - -
Gso1g0150 288 ProSiteProfiles Zinc finger RING-type profile. 111 153 IPR001841 -
Gso1g0150 288 PANTHER RING FINGER DOMAIN-CONTAINING 20 260 - -
Gso1g0150 288 SMART ring_2 111 152 IPR001841 -
Gso1g0150 288 CDD RING-H2_EL5_like 110 153 - -
Gso1g0150 288 Pfam Ring finger domain 110 153 IPR001841 -
Gso1g0150 288 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 72 159 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0150 Gso-Chr1 1688038 1688904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0150 29 244 Rapid Response to Elicitors AT3G05200 34.979 8.97e-36 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0150 - - gmx:102667137 573.933