Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0142 ATGGTTGAGTCCTGGGAAGAGCAAATAAATAATCACCAGGCAGTAGGACAATTACAGGCCGAGCTCTTTCCTCAACATGGCTTGGCATGTCTTAATTGTCGTCAATTTAATGCAAAGGGTTTCAGGAAGGTTGATCCAGATCGCTGGGAATTTGCAAATGAGGGTTTTTTGAAGGGTCAAAAGCACTTGCTTAGGAGTATTACACGACGAAAACCTGCCCATGGTCAAAATCATCAACAGCCTCAGCAACCGCATGGACAGAGTTCATCGGTAGGGGCATGTGTAGAAGTTGGGAAGTTTGGGCTTGAGGAAGAGGTTGAGAGGCTTAAAAGAGATAAGAATGTGCTCATGCAAGAGCTTGTGAGGTTGAGGCAGCAGCAACAGACCACTGATAACCAGCTGCAAACAATGGTTCAGCGCCTTCAGGGAATGGAGCAACGACAGCAGCAAATGATGTCATTCCTTGCCAAAGCTGTCCAGAGCCCTGGCTTCTTTGCTCAGTTTGTACAACAGCAAAATGACAGCAATAGGCGCATAACTGAAGTCAACAAAAAGCGTCGGCTTAAACAGGAAGGTATGGCTGAAACAGAGCATGCTGCTACTCCAGATGGACAAATTATTAAATATCAACCTATGGTGAATGAAGCAGCAAAAGCAATGCTTAGGCAGATCATGAAATGGGATACTTCTTGTGTAGAATCTTTGAATAAAAATTCTGATAACTACGTGATTGGTGATGCTTCATCATCTTCCAGTGGAATGGACAGTAGCAGCTCTTCAGGCTGGACTTCTGGAGTAACTCTTAAAGAGGTCTCTCCAGCTTCGGTGCAGTCTTCACATGTTCCAGCTGCAACTGGGACTCAAGGGCATGTCCCCTCAACCGTTAAACCTGAAATTTTATCTGTACCACAAGCAGTAGCTTCTGAAAAAGTTATGAAAGATGGAGCACATGATCCACCTTCTATCCCTGTGTCTCAAGCAGATGTAATGATCCCTGATCTTCCTCCAATAACAGAGATGGTGACAGGAAATATTCTTGATATTCCTGAAGAAAATTATATGGCAACTGAGACAGATGAGGGATACATGGATTCTTCATTGGGGGCTGGTGGGTCATTTCCCATTGATTTCGAAGGTATTTCACCTGATGCAGACATTGATGATTTGTTAGCCAATCCTATTTGGGATGAAATTTTGCAAACTTCAGTTCCAGAGGATATCGATACCAATGTGGCTGAAGCATCCAAAGGGAATGAGGTCCAACCAATGGAAAATGGATGGGGCAAAACTCAACATATGGATCACCTTACAGAGCAGATGGGTCTTCTTTCTTCCGATGCAAAAAGAGTTTGA 1353 0.4383 MVESWEEQINNHQAVGQLQAELFPQHGLACLNCRQFNAKGFRKVDPDRWEFANEGFLKGQKHLLRSITRRKPAHGQNHQQPQQPHGQSSSVGACVEVGKFGLEEEVERLKRDKNVLMQELVRLRQQQQTTDNQLQTMVQRLQGMEQRQQQMMSFLAKAVQSPGFFAQFVQQQNDSNRRITEVNKKRRLKQEGMAETEHAATPDGQIIKYQPMVNEAAKAMLRQIMKWDTSCVESLNKNSDNYVIGDASSSSSGMDSSSSSGWTSGVTLKEVSPASVQSSHVPAATGTQGHVPSTVKPEILSVPQAVASEKVMKDGAHDPPSIPVSQADVMIPDLPPITEMVTGNILDIPEENYMATETDEGYMDSSLGAGGSFPIDFEGISPDADIDDLLANPIWDEILQTSVPEDIDTNVAEASKGNEVQPMENGWGKTQHMDHLTEQMGLLSSDAKRV* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0142 450 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-1 33 436 - -
Gso1g0142 450 Coils Coil 99 126 - -
Gso1g0142 450 SMART hsfneu3 1 70 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gso1g0142 450 MobiDBLite consensus disorder prediction 273 294 - -
Gso1g0142 450 MobiDBLite consensus disorder prediction 71 90 - -
Gso1g0142 450 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 33 436 IPR027725 -
Gso1g0142 450 MobiDBLite consensus disorder prediction 73 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0142 Gso-Chr1 1577833 1581532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0142 33 444 HSF AT1G32330 50.000 2.05e-124 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0142 K09419 - gmx:100815121 770.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0142 1 1577833 1581532 Gso1g0142 1 1577833 1581532 ECH
Gso1g0142 1 1577833 1581532 Gso9g1705 9 41476282 41479959 GST