Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0131 ATGGAGCTATTCCCAGCACAACCAGACTTGTCCTTACAAATCAGCCCTCCAAACGCCAATCCCACATCAAGTTGGAGGAGAAGCACAGAAGAAGACATGGATTTGGGGTTTTGGAAGAGAGCCTTGGACTCAAGAAACTCCATTCAATCAACAATGGCCAAACAAGACTCTTGCTTCGACCTCTCCCTCTCCAATCCAAAAGCCTCAGATAACAACAACTCCAACCTCATTCATCACCACCACTTCCAAACAAGTAATGCCACCACCATCATCAACCCTTTCCAACTACCCTTTCAGCAAAACCACTTCTTCCACCAGCAGCAGCAGCCACTGTTCCAACCTCAGCACCAAAGCCTAAGCCAAGACCTTGGCTTTCTAAGACCCATTAGAGGAATCCCAGTGTACCAAAACCCTCCTCCTATACCATTCACCCAGCACCATCATCTCCCTCTTGAAGCTTCCACCACCACCCCTTCGATTATTTCCAACACCAACACTGGCTCCACCCCTTTCCACTCTCAGGCCCTTATGAGATCAAGATTCTTGTCACGCTTCCCTGCTAAGCGTAGCATGAGGGCTCCGAGGATGCGTTGGACTTCTACCCTCCATGCTCGCTTTGTTCATGCTGTTGAACTCTTGGGTGGCCACGAAAGGGCTACACCCAAATCAGTTCTTGAACTAATGGATGTCAAGGATCTCACTTTAGCTCATGTTAAGTCTCATTTACAGATGTACCGGACGGTGAAAACTACAGATAGGGCGGCGGCTTCATCAGGGCAATCAGATGTGTATGATAATGGTTCATCTGGTGATACTTCTGATGACTTAATGTTTGACATAAAATCTTCAAGAAGGTCTGATCTATCAGTTAAGCAAGGAAGATCAAGTGTTAATCAAGATAAGAAATATCATGGTCTTTGGGGTAACTCTTCAAGGGAAGCTTGGTTGCATGGGAAGACAAAGGCTGATTCTGTTGGAAACGTGCCTTCTTATCTTGAGAAGGAAATGGATCCAAAGTGCCTAAGCTATGAGAGAATATCAGATGGAAGTTCATCCTCAAATCTTTCAGGATCAAGCCCAAAGAAGCCTAATTTGGATTTGGAATTCAGCTTGGGCCAGCCACTTTAA 1128 0.4583 MELFPAQPDLSLQISPPNANPTSSWRRSTEEDMDLGFWKRALDSRNSIQSTMAKQDSCFDLSLSNPKASDNNNSNLIHHHHFQTSNATTIINPFQLPFQQNHFFHQQQQPLFQPQHQSLSQDLGFLRPIRGIPVYQNPPPIPFTQHHHLPLEASTTTPSIISNTNTGSTPFHSQALMRSRFLSRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASSGQSDVYDNGSSGDTSDDLMFDIKSSRRSDLSVKQGRSSVNQDKKYHGLWGNSSREAWLHGKTKADSVGNVPSYLEKEMDPKCLSYERISDGSSSSNLSGSSPKKPNLDLEFSLGQPL* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0131 375 MobiDBLite consensus disorder prediction 252 276 - -
Gso1g0131 375 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 374 IPR044847 GO:0000976|GO:0006355|GO:0010158
Gso1g0131 375 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 194 247 IPR006447 GO:0003677
Gso1g0131 375 MobiDBLite consensus disorder prediction 1 30 - -
Gso1g0131 375 MobiDBLite consensus disorder prediction 252 277 - -
Gso1g0131 375 MobiDBLite consensus disorder prediction 11 26 - -
Gso1g0131 375 MobiDBLite consensus disorder prediction 342 375 - -
Gso1g0131 375 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 374 - -
Gso1g0131 375 Gene3D - 193 250 - -
Gso1g0131 375 SUPERFAMILY Homeodomain-like 191 247 IPR009057 -
Gso1g0131 375 MobiDBLite consensus disorder prediction 345 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0131 Gso-Chr1 1499021 1504239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0131 1 374 G2-like Transcription Factor Family AT4G17695 38.265 4.27e-61 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gso1g0131 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0131 - - gmx:100798081 647.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0131 1 1499021 1504239 Gso1g0131 1 1499021 1504239 ECH
Gso1g0131 1 1499021 1504239 Gso9g1714 9 41548510 41553965 GST