Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0122 ATGGCAGAAGCAGAATCCGAAGCGCTGCGCCTCAAGGCCATGGCGGAGTCCAAGTTCAAAGCCTCCAACAACGCCAAATCCGCTCTCAAGTACGCCAACCGCGCCCACCGCCTCTGCCCGCACCTCGCCGGCGTGCCGGAGACCGTCGCTGCCCTCTCCGTCCTCGCCGCGCCGGACTGGTACCGCGCCCTCGGCGCCGAGCCCTTCGCGAGCAGCAGCGTCATCCGGAGGCAGTACAAGAAGCTCGCGCTGCTCCTCCATCCCGACAAGAACCCCCACGTGGCCTCCGAGGATGCCTTCAAGCTCCTCGGCGAGGCCTTCCGCTTTCTCTCCGACAGAAACCGCCGCCGCGAGTACGACGCCGAGCTTCGACTTAAAATCGAGGCGGCGGAGAGTGAGAGCGAGACATTCTGGACTGCTTGCTCCACTTGCAGGCTCCTGCACCAGTTTGAGAGGAGGTACTTGGGGCAGGAATTGGTGTGTCCGAGTTGTGAGAAGGGTTTTAGGGCTGTGGAAGCGGTTCAGAGTGATGATGATGGGGATGTTAGGGTTAGGAGTAGGAGGTTAAAGTTGAAAGAGATGGAGAAGAGGGAAATTGGGGTGGAAGGGAAAGTGGGGAATGCGAAGGAAGGGAGATTGGGGAAGAGAATGTGTTCGGTTGGGGAGGTTTTGGAGAGGGCTAAACCTAGTAATAGTAAGAGGGTTAAAAAAAATGGGGAGGAAATGATGACATTGGCTGAATTCCAGAGTCAAGTGAAGAGAAAATTGCAGGGGGAAAAGTTGAAGGCAAAAGGAAATGAAAAGGAAAAGGAGAAGGAGGATGGAATTGAGAAGAGGAGAAACCGGGCGGAGAGGCGGCAGGGATTGAGAAATAATGGAGGTTTAGAGGTTGGGGAGGTGAGGGGTTTGAAGAAGAGTGTGAAGCCTGCGATTGAGGAGAAGAGGAAGGGGTTGAGAATTGAGAAGCATAGGGGGGGTTCTAGTGGAGGGGATTTGGAGGATATGGCAGTGGTGGATTCGGATTTTTATGATTTTGACAAAGATAGAGTGGAGAAAAGCTTTAAGAAAGGCCAAGTATGGGCGGTGTATGAAGATGAGGATGGAATGCCGAGGAATTATGCCTTGATTGATGAAACTGTCTCGGTGAATCCCTTTGGAGTGAGGATAAGTTGGTTGGATGTACAGAACAGTGGGGATGGGAGGATAGTTAGTAGGGAGAAAATTGGGTTTCATATACCTTGTGGGAGATTTAAGGCTACCAGGAAGGCTTCTGTAAATTCGGTGAATATCTTTTCTCATGTTGTGGATTGTGACAGGGCAGCGCGCGAGCTTTACAAAATTTACCCCAAGAAGGGATCGGTATGGGCGCTTTATGGGGAGGGAAGTATTGATGTGGATGAGGGCAAGGGATGCTATGACATTGTCGTGTTTTTGACGAGTTACAATGAGGTGAATGGTCTGAGTATGGCGCATCTTGAGAAGGTTGATGGTTACAAGACAGTATTCAAGAGACAGGAGAAGGGGAGTGGTGCTATTAGATTTCTTGGGAAGGATGACATGTGGTTAGTTTCACATCAGATTCCTGCACGGAAGCTTCTTTGTGATGAAACTCCTGAACTGTTGAAAGATTGTTGGGAACTTGATCCTGCTTCACTTCCTTCAGATTTACTTACTATTGGTGGATAG 1686 0.5083 MAEAESEALRLKAMAESKFKASNNAKSALKYANRAHRLCPHLAGVPETVAALSVLAAPDWYRALGAEPFASSSVIRRQYKKLALLLHPDKNPHVASEDAFKLLGEAFRFLSDRNRRREYDAELRLKIEAAESESETFWTACSTCRLLHQFERRYLGQELVCPSCEKGFRAVEAVQSDDDGDVRVRSRRLKLKEMEKREIGVEGKVGNAKEGRLGKRMCSVGEVLERAKPSNSKRVKKNGEEMMTLAEFQSQVKRKLQGEKLKAKGNEKEKEKEDGIEKRRNRAERRQGLRNNGGLEVGEVRGLKKSVKPAIEEKRKGLRIEKHRGGSSGGDLEDMAVVDSDFYDFDKDRVEKSFKKGQVWAVYEDEDGMPRNYALIDETVSVNPFGVRISWLDVQNSGDGRIVSREKIGFHIPCGRFKATRKASVNSVNIFSHVVDCDRAARELYKIYPKKGSVWALYGEGSIDVDEGKGCYDIVVFLTSYNEVNGLSMAHLEKVDGYKTVFKRQEKGSGAIRFLGKDDMWLVSHQIPARKLLCDETPELLKDCWELDPASLPSDLLTIGG* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0122 561 MobiDBLite consensus disorder prediction 257 297 - -
Gso1g0122 561 Pfam DnaJ domain 59 120 IPR001623 -
Gso1g0122 561 PRINTS DnaJ domain signature 61 79 IPR001623 -
Gso1g0122 561 PRINTS DnaJ domain signature 79 94 IPR001623 -
Gso1g0122 561 PRINTS DnaJ domain signature 95 115 IPR001623 -
Gso1g0122 561 CDD DnaJ 59 112 IPR001623 -
Gso1g0122 561 SUPERFAMILY Chaperone J-domain 53 123 IPR036869 -
Gso1g0122 561 SMART dnaj_3 58 115 IPR001623 -
Gso1g0122 561 MobiDBLite consensus disorder prediction 257 289 - -
Gso1g0122 561 PANTHER BNAC03G44070D PROTEIN 6 560 - -
Gso1g0122 561 Coils Coil 253 286 - -
Gso1g0122 561 Pfam Domain of unknown function (DUF3444) 334 533 IPR024593 -
Gso1g0122 561 ProSiteProfiles dnaJ domain profile. 59 123 IPR001623 -
Gso1g0122 561 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 6 560 - -
Gso1g0122 561 Gene3D DnaJ domain 52 144 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0122 Gso-Chr1 1350205 1353469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0122 6 175 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.964 1.22e-21 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0122 - - gmx:100813361 1088.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0122 1 1350205 1353469 Gso9g1724 9 41682424 41684547 GST
Gso2g0355 2 3882187 3886577 Gso1g0122 1 1350205 1353469 PCT
Gso16g0956 16 26501157 26504944 Gso1g0122 1 1350205 1353469 PCT