Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0120 ATGTTACTTGTCATTCCCAGAGGACAATTTATAATGTCTACTATTTCTGGTATGCCGCTTTTCTTTCTTTGTTGCTTGTATCTAATAATAGTAATATGTGAAGCCAGCTTCGGACCAAGTTATGAATACTCCAAATACTGTAATAACAGTAATGGAAACTACACAGCCAATAGCATCTACCAAACCAACCTCAATACCCTCTTATCCACCCTCACTTCCCACACAGAAATCGACTATGGTTTCTACAATTTCTCGCATGGCCAAAACTCAGACAAAGTATACGCAATAGGGTTATGCAGAGGAGATGTTAAGCCAGACGAATGTCGCAGCTGCCTCAACAATTCTAGAGTGAGTCTCACACGGTTGTGTCCAAAGCAGTTAGAGGCAATCAATTGGGAAGAGAAGTGCATGTTGCGCTACTCCAACCGCGCAATTTTTCACACCATGGATGCTTCTTTTTCGTATCATATGAACAACGTAAACAATGCAACGGATGCGGAAGAGTTCAATAAAGTGTTGGGTGAGTTACTTAGAAATCTGAGTGACAAAGCTGCATCAGGTGACTCTCGTCGCAAGTATGCCGCGGATACTGCAGTCTTTGCGAATCTCCAAACCATATACGGTCTTGTGCAGTGTACGCCTGATTTGTCAAGGCAAGACTGCGGTAAATGCTTGCATTGGAGTTTGGCAGATTTCGGAAATGTTTTCAAAAACAAAGTTGGTGCTGTAGTGCTTAGACCAAGTTGTAATGTTAGATATGAAATCTACCCCTTCTACGATGAACCTACACCATCAGCATCGGTACCACTTTCCCTAAAAGAAAAGGGCAACTCACTGCGAACTACAATCGCCATAGTTGTGCCTACCGTTCTCGTTGTTGTTGCTTTGCTCATTTTCATTAGCATATATTTTAGGAGGAGGAAATTAGCAAGGAAAAATCTTCTCGCTGATGAAGACGATGATGAAATTGAATTGGCTGAATCATTGCAATTCAACTTCGACACAATAAAAGTTGCAACAAATAACTTCTCTGACTCTAATAAACTCGGAGAAGGCGGGTTTGGAGCTGTTTACCAGGGCAGGCTCTCTAATGGACAAGTGATTGCTGTCAAAAGGTTGTCAAGCGATTCTGGCCAAGGTGGCGTGGAATTTAAGAATGAAGTCCTTTTACTGGCCAAGCTTCAGCACCGAAATTTAGTTAGGCTACTTGGTTTTAGTTTGGAAGGGAAAGAAAAGCTACTTGTTTATGAATATGTTCCAAATAAAAGCCTTGATTACTTCATATTTGATCCAACAAAGAAAGCACGACTGGATTGGGATAGACGATACAAAATCATTCAAGGTATTGCTCGAGGTCTTCTTTATCTTCACGAGGATTCACGATTGCGCATTATACATCGTGATCTCAAAGCAAGCAATGTTCTCTTAGATGAAGAGATGATTCCTAAAATATCAGATTTTGGTATGGCAAGACTGATTGTTGCAGGTCAAACACAAGAAAATACAAGTAGAGTTGTTGGAACCTATGGATATATGGCACCAGAATATATAATGCATGGACAATTTTCAATAAAATCAGATGTCTTCAGTTTTGGTGTACTAGTTCTTGAGATTGTAAGTGGCCAAAAAAACCATGGTATTCGTCATGGGAAGAATGTGGAAGATCTACTAAACTTTGCATGGAGAAGCTGGCAAGAGGGGACAGTTACAAATATTATAGATCCAATATTAAACAATAGTTCACAGAATGAAATGATAAGATGCACCCACATTGGTTTACTCTGTGTTCAAGAAAATCTAGCCAACAGACCAACCATGGCTAACGTTGCACTCATGCTAAATAGTTGTTCTATCACTCTCCCAGTGCCTACAAAACCTGCTTTTTTTATGGATAGTGCAACTACAAGCCTTCCAAACATGTCATGGGAAGTTAATTCAGGGACAACACGATCGAATCAGTCCACAACCAAATCAGCTCACGACTCAGTAAGTGAAACTTCAATTTCTGAGCTATACCCTCGTTAG 2025 0.403 MLLVIPRGQFIMSTISGMPLFFLCCLYLIIVICEASFGPSYEYSKYCNNSNGNYTANSIYQTNLNTLLSTLTSHTEIDYGFYNFSHGQNSDKVYAIGLCRGDVKPDECRSCLNNSRVSLTRLCPKQLEAINWEEKCMLRYSNRAIFHTMDASFSYHMNNVNNATDAEEFNKVLGELLRNLSDKAASGDSRRKYAADTAVFANLQTIYGLVQCTPDLSRQDCGKCLHWSLADFGNVFKNKVGAVVLRPSCNVRYEIYPFYDEPTPSASVPLSLKEKGNSLRTTIAIVVPTVLVVVALLIFISIYFRRRKLARKNLLADEDDDEIELAESLQFNFDTIKVATNNFSDSNKLGEGGFGAVYQGRLSNGQVIAVKRLSSDSGQGGVEFKNEVLLLAKLQHRNLVRLLGFSLEGKEKLLVYEYVPNKSLDYFIFDPTKKARLDWDRRYKIIQGIARGLLYLHEDSRLRIIHRDLKASNVLLDEEMIPKISDFGMARLIVAGQTQENTSRVVGTYGYMAPEYIMHGQFSIKSDVFSFGVLVLEIVSGQKNHGIRHGKNVEDLLNFAWRSWQEGTVTNIIDPILNNSSQNEMIRCTHIGLLCVQENLANRPTMANVALMLNSCSITLPVPTKPAFFMDSATTSLPNMSWEVNSGTTRSNQSTTKSAHDSVSETSISELYPR* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0120 674 ProSiteProfiles Gnk2-homologous domain profile. 151 258 IPR002902 -
Gso1g0120 674 ProSitePatterns Protein kinases ATP-binding region signature. 349 371 IPR017441 GO:0005524
Gso1g0120 674 Gene3D Transferase(Phosphotransferase) domain 1 419 620 - -
Gso1g0120 674 SMART serkin_6 343 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso1g0120 674 ProSiteProfiles Gnk2-homologous domain profile. 42 145 IPR002902 -
Gso1g0120 674 MobiDBLite consensus disorder prediction 640 674 - -
Gso1g0120 674 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 20 643 - -
Gso1g0120 674 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672|GO:0006468
Gso1g0120 674 Gene3D - 41 144 IPR038408 -
Gso1g0120 674 Gene3D - 150 258 IPR038408 -
Gso1g0120 674 SUPERFAMILY Protein kinase-like (PK-like) 329 641 IPR011009 -
Gso1g0120 674 Pfam Salt stress response/antifungal 161 255 IPR002902 -
Gso1g0120 674 Pfam Salt stress response/antifungal 47 142 IPR002902 -
Gso1g0120 674 Gene3D Phosphorylase Kinase; domain 1 314 418 - -
Gso1g0120 674 Pfam Protein tyrosine and serine/threonine kinase 346 610 IPR001245 GO:0004672|GO:0006468
Gso1g0120 674 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 20 643 - -
Gso1g0120 674 ProSiteProfiles Protein kinase domain profile. 343 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso1g0120 674 CDD STKc_IRAK 349 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0120 Gso-Chr1 1320273 1329005 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0120 20 674 Receptor kinase-like Gene Family AT4G21410 47.453 0.0 592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso1g0120 PK_Tyr_Ser-Thr 4.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0120 - - gmx:100812828 1304.66