Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0093 ATGGCAGATAGTTCAGTATCCTTTTTACTGGACAAGCTGACTTTGTTACTTCAAGCAGAAGTGAATCTGCAGAGAGGGGTCCGTGAAGATGTTCAGCACATCAAATATGAACTAGAACGCCACAGGGGCATCTTGAGGGTGGCTGATGCTCTGGAAGACAAAGACCCTGAACTCAAAGCATGGGTTAAACGAGTAAGAGATGTTGCTCATGACATGGAAGATGCTATAGATGAATTTAGCCTTCGCCTTATTGATCAACATGGACAAGGCAACAGTTCTTCTTTTCATGTGAATTTTTTCACCCGGCATAGGATTGCTTCAAATATACAAAATATCAAATCCAGAGTGGACATTATCTCCCAGGGACGTCCAAACATAGCTGGGATTGGCTCAGGCTCAAGTCAACGGTTAAGGCTTGATAGCCAAGGAGATGCACTTCTGCTAGAAGAAGCTGATTTGGTGGGTATTGACAAACCCAAAAGGCAGCTCAGTGACTTGCTTTTCAATGAAGAAGCAGGTAGGGCTGTGATTCCCATTTATGGGATGGGAGGGTTGGGGAAAACCACCTTGGCAAAACAAGTCTATGATGATCCAAAAGTGAAGAAGCGTTTCAGGATTCATGCTTGGATTAATGTTTCTCAGTCTTTTCAACTAGAAGTGCTCCTGAAAGACCTGGTTCAACAGCTCCATAATGTCATTGGCAAACCATCTCCGGAAGCAGTTGGACAAATGAAGAGTGACCAGCTCAAAGAGTTGATCAAGAACTTGCTTCAGCAAAGCAGGTATCTCATTGTGCTGGATGATGTGTGGCATGTAAAGGTATGGGATTCTGTCAAACTTGCTTTGCCTAATAACAACCGTGGCAGTAGAGTGATGCTTACCACACGCAAGAAAGATATAGCTTTGTATTCCTGTGCTGAATTGGGTAAGGATTTTAACCTTGAATTCTTACCTGAGGAAGAAAGTTGGTATCTTTTCTGCAAGAAAACATTTCAGGGTAACCCATGCCCTCCTTATCTGGAGGCAGTTTGCAGGAATATCTTAAAAATGTGTGGGGGGTTGCCACTGGCAATTGTGGCAATTGGTGGTGCATTGGCTACAAAAAACAGGGCAAACATAGAAGAGTGGCAGATGGTTTACAGAAGTTTTGGGTCTGAAATTGAAGGCAATGACAAACTGGAGGATATGAAGAAAGTGCTTTCCCTGAGTTTCAATGAGTTGCCTTACTATCTCAAGTCCTGTTTGCTGTACCTAAGCATATTTCCCGAGTTTCATGCTATTGAGCACATGCGATTGATTCGCTTGTGGATAGCTGAAGGGTTTGTGAACGGAGAAGATGGAAAGACACTGGAGGAAGTTGCAGACAGTTACCTCAAGGAGCTCTTGGACAGAAGTCTGCTGCAAGTGGTAGCAAAAACCAGTGATGGCAGGATGAAGACTTGTCGCATGCATGATCTTCTAAGGGAGATTGTCAATTTGAAGTCAAAGGATCAGAACTTTGCAACAATAGCCAAAGACCAAGATATAATCTGGCCAGACAAAGTTCGACGCTTATCAATCATAAACACATTGAATAATGTGCAACAAAATAGGACCACATTCCAACTTCGGTCTCTGCTGATGTTTGCCTCATCAGATTCACTCGAGCATTTTTCTATACGTGCATTATGTTCCTCTGGTTATAAGTTACTCAGGGTGTTAGATTTGCAGGATGCACCTTTGGAGGTTTTTCCTGCTGAAATTGTCAGCCTATACCTTCTCAAGTATCTGAGTTTGAAGAATACAAAGGTGAAAAGCATACCAGGTTCCATTAAGAAGCTGCAGCAGTTGGAGACATTAGATCTTAAACACACTTATGTCACTGTATTGCCAGTTGAAATTGTGGAGCTCCAACGATTACGCCATCTCTTGGTGTATCGTTATGAGATTGAATCCTATGCTTATTTACATTCAAGGCATGGCTTCATGGTGGCTGCCCCTATAGGACTTATGCAATCTTTGCAAAAGCTTTGTTTTATAGAGGCGAATCAGGCTTTGATGATTGAGCTAGGAAAACTCACTCAACTCAGGAGGCTTGGCATCAGAAAGATGAGAAAACAAGATGGTGCTGCTTTGTGTTCATCCATTGAGAAGATGATCAATCTCCGCTCATTGTCCATAACTGCAATTGAAGATGATGAGATAATTGATATTCACAACATCTTCAGGCCTCCTCAGTATCTCCAGCAGTTATACTTGGGTGGGCGTCTAGACAATTTTCCCCAATGGATAAGTTCTCTCAAGAATTTGGTCCGAGTGTTTCTAAAATGGAGCCGGTTAGAAGAGGATCCTCTGGTACATCTTCAAGATTTGCCAAATCTAAGACATCTTGAGTTTCTTCAAGTTTATGTTGGTGAGACATTGCATTTCAAGGCAAAAGGGTTTCCTAGTCTGAAGGTGTTAGGCCTTGATGATTTAGATGGACTGAAATCAATGACTGTGGAGGAGGGAGCAATGCCTGGTCTTAAAAAGCTCATCATCCAGCGCTGTGATTCATTGAAGCAGGTACCATTAGGCATTGAACACCTAACAAAACTAAAATCAATAGAGTTTTTTGATATGCCTGAAGAATTGATTACAGCACTGCGTCCAAATGGAGGTGAGGATTATTGGAGAGTACAACATGTCCCAGCAGTTTATATCTCCTATTGGAGGGATGGGGGTTGGGATGTCTACTCATTAGAGACATTAGGAGAGAGAGAGAGTGATTCCAGTTCTGGTACTGCAAAGAGAAGTCTTGAAATTTGTACACTCTGGAAGGTTTAA 2805 0.4232 MADSSVSFLLDKLTLLLQAEVNLQRGVREDVQHIKYELERHRGILRVADALEDKDPELKAWVKRVRDVAHDMEDAIDEFSLRLIDQHGQGNSSSFHVNFFTRHRIASNIQNIKSRVDIISQGRPNIAGIGSGSSQRLRLDSQGDALLLEEADLVGIDKPKRQLSDLLFNEEAGRAVIPIYGMGGLGKTTLAKQVYDDPKVKKRFRIHAWINVSQSFQLEVLLKDLVQQLHNVIGKPSPEAVGQMKSDQLKELIKNLLQQSRYLIVLDDVWHVKVWDSVKLALPNNNRGSRVMLTTRKKDIALYSCAELGKDFNLEFLPEEESWYLFCKKTFQGNPCPPYLEAVCRNILKMCGGLPLAIVAIGGALATKNRANIEEWQMVYRSFGSEIEGNDKLEDMKKVLSLSFNELPYYLKSCLLYLSIFPEFHAIEHMRLIRLWIAEGFVNGEDGKTLEEVADSYLKELLDRSLLQVVAKTSDGRMKTCRMHDLLREIVNLKSKDQNFATIAKDQDIIWPDKVRRLSIINTLNNVQQNRTTFQLRSLLMFASSDSLEHFSIRALCSSGYKLLRVLDLQDAPLEVFPAEIVSLYLLKYLSLKNTKVKSIPGSIKKLQQLETLDLKHTYVTVLPVEIVELQRLRHLLVYRYEIESYAYLHSRHGFMVAAPIGLMQSLQKLCFIEANQALMIELGKLTQLRRLGIRKMRKQDGAALCSSIEKMINLRSLSITAIEDDEIIDIHNIFRPPQYLQQLYLGGRLDNFPQWISSLKNLVRVFLKWSRLEEDPLVHLQDLPNLRHLEFLQVYVGETLHFKAKGFPSLKVLGLDDLDGLKSMTVEEGAMPGLKKLIIQRCDSLKQVPLGIEHLTKLKSIEFFDMPEELITALRPNGGEDYWRVQHVPAVYISYWRDGGWDVYSLETLGERESDSSSGTAKRSLEICTLWKV* 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0093 934 SUPERFAMILY L domain-like 482 870 - -
Gso1g0093 934 Gene3D - 5 119 - -
Gso1g0093 934 Gene3D - 316 403 IPR042197 -
Gso1g0093 934 Gene3D - 404 492 IPR036388 -
Gso1g0093 934 PRINTS Disease resistance protein signature 176 191 - -
Gso1g0093 934 PRINTS Disease resistance protein signature 256 270 - -
Gso1g0093 934 PRINTS Disease resistance protein signature 351 365 - -
Gso1g0093 934 PRINTS Disease resistance protein signature 605 621 - -
Gso1g0093 934 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 418 IPR027417 -
Gso1g0093 934 Pfam Rx N-terminal domain 6 95 IPR041118 -
Gso1g0093 934 PANTHER OS08G0539900 PROTEIN 147 896 - -
Gso1g0093 934 PANTHER OS08G0539900 PROTEIN 1 133 - -
Gso1g0093 934 Gene3D Ribonuclease Inhibitor 493 651 IPR032675 -
Gso1g0093 934 PANTHER DISEASE RESISTANCE PROTEIN RP 147 896 IPR044974 GO:0006952
Gso1g0093 934 PANTHER DISEASE RESISTANCE PROTEIN RP 1 133 IPR044974 GO:0006952
Gso1g0093 934 Pfam NB-ARC domain 158 405 IPR002182 GO:0043531
Gso1g0093 934 Gene3D Ribonuclease Inhibitor 660 875 IPR032675 -
Gso1g0093 934 CDD RX-CC_like 2 120 IPR038005 -
Gso1g0093 934 Gene3D - 142 306 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0093 Gso-Chr1 1045009 1048378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0093 176 618 WRKY Transcription Factor Family AT5G45050 21.369 3.32e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0093 K13457 - gmx:100305458 1810.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0093 1 1045009 1048378 Gso9g1740 9 41851841 41854973 GST