Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0061 ATGGGGAGAGCCACTAGGTGGGTGAAGAGTTTGTTTGGAATAAGAAGAGAGAAAGAGAAGAAACTAAACTTCAGGTGTGGAGAGGCTAAAAGTATGGAATTGTGTTGTTCTGAGAGTACTAGTAATTCAACAGTTTTGTGTCACAATTCAGGGACTATACCCCCCAACCTTTCTCAAGCTGAGGCTGCTTGGTTACAATCATTCTGCACAGAGAAGGAGCAAAACAAGCACGCCATCGCAGTTGCTGCTGCCACGGCGGCAGCTGCTGATGCTGCTGTGGCAGCAGCACAGGCTGCGGTGGCGGTTGTTAGGCTCACCAGCCAAGGAAGGGGTCGCACCATGTTTGGTGTTGGACCTGAGATGTGGGCTGCCATCAAGATTCAAACAGTGTTTAGAGGATTCCTGGCAAGGAAGGCACTAAGGGCATTAAAAGGATTGGTGAAATTGCAGGCACTTGTCAGAGGGTATTTAGTGAGGAAGCTAGCAACAGCAACCCTGCATAGTATGCAGGCTCTTGTTAGAGCTCAAGCTAGAATGCGGTCCCACAAATCTCTCAGGCCCATGACCACAAAGAATGAAGCATATAAACCTCATAATAGAGCAAGAAGATCCATGGAGAGGTTTGATGACACTAAGAGTGAGTGTGCAGTTCCAATCCACAGTAGAAGGGTATCATCTTCTTTTGATGCTACAATTAACAACAGTGTTGATGGGAGCCCCAAAATAGTGGAAGTGGACACTTTCAGGCCTAAGTCAAGGTCTAGAAGGGCAATTTCAGATTTTGGTGATGAACCATCACTAGAAGCACTTTCTTCTCCCTTACCAGTTCCGTACAGAACCCCTACACGTTTGTCCATACCAGACCAAAGGAATATTCAGGACTCTGAATGGGGGTTAACAGGAGAAGAGTGCAGATTCTCTACAGCACATAGCACTCCGCGCTTCACAAATTCTTGTACCTGTGGCTCAGTTGCACCATTGACACCAAAGAGTGTGTGCACTGATAACTACTTGTTCCTAAGGCAGTATGGGAATTTTCCAAACTACATGACTAGTACTCAGTCTTTTAAGGCCAAATTGAGGTCTCATAGTGCTCCAAAGCAACGGCCAGAACCTGGTCCAAGGAAGAGGATTTCCCTCAATGAAATGATGGAGTCTAGGAATAGTTTGAGTGGGGTTAGAATGCAGAGGTCTTGCTCACAGGTTCAAGAAGTCATTAATTTCAAGAATGTTGTGATGGGGAAGCTTCAGAAATCCACATAA 1263 0.4592 MGRATRWVKSLFGIRREKEKKLNFRCGEAKSMELCCSESTSNSTVLCHNSGTIPPNLSQAEAAWLQSFCTEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSQGRGRTMFGVGPEMWAAIKIQTVFRGFLARKALRALKGLVKLQALVRGYLVRKLATATLHSMQALVRAQARMRSHKSLRPMTTKNEAYKPHNRARRSMERFDDTKSECAVPIHSRRVSSSFDATINNSVDGSPKIVEVDTFRPKSRSRRAISDFGDEPSLEALSSPLPVPYRTPTRLSIPDQRNIQDSEWGLTGEECRFSTAHSTPRFTNSCTCGSVAPLTPKSVCTDNYLFLRQYGNFPNYMTSTQSFKAKLRSHSAPKQRPEPGPRKRISLNEMMESRNSLSGVRMQRSCSQVQEVINFKNVVMGKLQKST* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0061 420 PANTHER IQ-DOMAIN 5-RELATED 1 420 - -
Gso1g0061 420 Pfam IQ calmodulin-binding motif 147 160 IPR000048 GO:0005515
Gso1g0061 420 Pfam IQ calmodulin-binding motif 122 141 IPR000048 GO:0005515
Gso1g0061 420 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 420 - -
Gso1g0061 420 ProSiteProfiles IQ motif profile. 144 171 IPR000048 GO:0005515
Gso1g0061 420 SMART iq_5 142 163 IPR000048 GO:0005515
Gso1g0061 420 SMART iq_5 119 141 IPR000048 GO:0005515
Gso1g0061 420 Pfam Protein of unknown function (DUF4005) 313 391 IPR025064 -
Gso1g0061 420 Gene3D - 120 171 - -
Gso1g0061 420 ProSiteProfiles IQ motif profile. 120 148 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0061 Gso-Chr1 714489 716652 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0061 1 395 IQD Protein Family AT3G16490 49.633 1.32e-90 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0061 - - gmx:100797909 788.489