Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso1g0041 | ATGGGAAGGGCTCCATGTTGTGACAAATCCAATGTGAAAAGAGGGCCTTGGTCTCCTGATGAAGATGCCACCCTCAAAAACTACCTTGAGAAACATGGCACAGGTGGTAACTGGATAGCTCTCCCCAAAAAAGCAGGCCTTAAGCGTTGTGGGAAGAGCTGTCGTCTAAGATGGCTAAACTATCTCAGGCCTCATATTAAGCTTGGAGGTTTCACTGAAGAGGAAGACAAAATTATCTGCACCCTTTATGACACCATCGGAAGCAGGTGGTCCTTTATAGCAGCTCAACTTCCCGGGAGAACAGACAATGATGTGAAAAATCACTGGAACACCAAGCTAAAGAAAAAGTTCTTGGCAGGAAACACAAGTAGTACTGCTGCCACGACAAGCAACAACAATGTCACTTTCAGCAATACTAGTTATTCTGATCAAGTTAAGACCCTTGTCTTGGATCATCAAAAACTGAACTCAGCTGATAATTGGTTTGACTACTCCTACAATGTTTTGGAATTGGAACAAACACCAATTCCAGTTCCTTTTCCAATGTCTCAGGAATTAGAGGCTTTTAATTATACTGCTGGGAGTATAAGTTGTAGTGCACCACCACCCTCTAAGGAAGTTTCAATGCTTTCCAATGCAGACAATCATACGCTATGGTTTGGTTATGACCATGCAAGTGAAGATGATCCAAATTTGCTTGAGTTTGTGCTTGATGATGATCTGCTGAATCATGGATTTGTTTCTCAAGACAAAAGCTGCAGCCAAGTTGGTCCACCATCTGGCTAA | 786 | 0.4262 | MGRAPCCDKSNVKRGPWSPDEDATLKNYLEKHGTGGNWIALPKKAGLKRCGKSCRLRWLNYLRPHIKLGGFTEEEDKIICTLYDTIGSRWSFIAAQLPGRTDNDVKNHWNTKLKKKFLAGNTSSTAATTSNNNVTFSNTSYSDQVKTLVLDHQKLNSADNWFDYSYNVLELEQTPIPVPFPMSQELEAFNYTAGSISCSAPPPSKEVSMLSNADNHTLWFGYDHASEDDPNLLEFVLDDDLLNHGFVSQDKSCSQVGPPSG* | 262 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso1g0041 | 261 | CDD | SANT | 71 | 113 | IPR001005 | - | |
Gso1g0041 | 261 | PANTHER | OS09G0431300 PROTEIN | 1 | 147 | - | - | |
Gso1g0041 | 261 | ProSiteProfiles | Myb-like domain profile. | 63 | 113 | IPR001005 | - | |
Gso1g0041 | 261 | CDD | SANT | 16 | 62 | IPR001005 | - | |
Gso1g0041 | 261 | Gene3D | - | 70 | 141 | - | - | |
Gso1g0041 | 261 | SUPERFAMILY | Homeodomain-like | 11 | 109 | IPR009057 | - | |
Gso1g0041 | 261 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 71 | 117 | IPR017930 | - | |
Gso1g0041 | 261 | Pfam | Myb-like DNA-binding domain | 71 | 111 | IPR001005 | - | |
Gso1g0041 | 261 | Pfam | Myb-like DNA-binding domain | 14 | 62 | IPR001005 | - | |
Gso1g0041 | 261 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 9 | 66 | IPR017930 | - | |
Gso1g0041 | 261 | ProSiteProfiles | Myb-like domain profile. | 9 | 62 | IPR001005 | - | |
Gso1g0041 | 261 | SMART | sant | 13 | 64 | IPR001005 | - | |
Gso1g0041 | 261 | SMART | sant | 67 | 115 | IPR001005 | - | |
Gso1g0041 | 261 | Gene3D | - | 6 | 68 | - | - | |
Gso1g0041 | 261 | PANTHER | OS09G0431300 PROTEIN | 1 | 147 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso1g0041 | Gso-Chr1 | 493976 | 495943 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso1g0041 | 1 | 119 | MYB Transcription Factor Family | AT5G57620 | 79.832 | 4.03e-71 | 219 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Gso1g0041 | Myb_DNA-binding | 1.8e-13 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso1g0041 | K09422 | - | gmx:778160 | 538.495 |