Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0036 ATGGTGGAGAAGGCGAAGGGTAGAAAGGAGGAGGTGGTTACCCGTGAGTACACCATTAACCTCCACAAGCGCCTCCATGGCTGCACATTTAAGAAGAAAGCTCCTAAAGCTATTAAGGAGATAAGGAAATTTGCCCAAAAGGCCATGGGGACCAATGATGTGAGGGTGGATGTGAAGTTGAACAAGTTTGTCTGGAGCCAGGGAATCAGGAGTGTTCCAAGGAGGATTAGAGTAAGAATTGCTCGCAAGAGAAATGATGATGAAGATGCCAAGGAAGAGCTGTACTCTCTTGTTACCGTTGTTGAGATCCCTAAGGACGAGCTCAAAGGGTTGGGCACTAAGGTTATTGATGACGAGGATTGA 363 0.4683 MVEKAKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTNDVRVDVKLNKFVWSQGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVVEIPKDELKGLGTKVIDDED* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0036 120 CDD Ribosomal_L31e 9 92 IPR000054 GO:0003735|GO:0005840|GO:0006412
Gso1g0036 120 Gene3D - 9 120 IPR023621 -
Gso1g0036 120 PANTHER 60S RIBOSOMAL PROTEIN L31 1 120 IPR000054 GO:0003735|GO:0005840|GO:0006412
Gso1g0036 120 SMART Ribosomal_L31e_2 10 93 IPR000054 GO:0003735|GO:0005840|GO:0006412
Gso1g0036 120 PANTHER 60S RIBOSOMAL PROTEIN L31-2-RELATED 1 120 - -
Gso1g0036 120 Pfam Ribosomal protein L31e 11 92 IPR000054 GO:0003735|GO:0005840|GO:0006412
Gso1g0036 120 ProSitePatterns Ribosomal protein L31e signature. 54 68 IPR020052 GO:0003735|GO:0005840|GO:0006412
Gso1g0036 120 SUPERFAMILY Ribosomal protein L31e 11 92 IPR023621 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0036 Gso-Chr1 465901 467129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0036 2 120 Cytoplasmic Ribosomal Protein Gene Family AT2G19740 80.672 1.60e-67 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0036 K02910 - gmx:100305583 225.713