Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0031 ATGGGTCAGCGAAAGAACGACAACAACATCAATCAGTGCTCCTCAAGCAAGGAAGACGCTGACATGAATAACAACCACCTTCGCTTTGAAGAGGCTGTCGACGAGAGTTCCAACCTCGACCAATCCATGTGCGACATCGAAGAATCCGATGATAAAACCAGCGCCGACTATTACTTCGATTCCTACTCTCATTTTGGAATTCACGAAGAGATGTTGAAGGACACTGTGAGAACCAAGACATATCAAAATGTTATTTATCAGAACAAGTTTTTATTCAAGAATAAAGTAGTTCTTGATGTTGGTGCTGGGACTGGGATTTTATCACTATTTTGTGCCAAAGCAGGGGCAGAACACGTCTATGCGGTTGAGTGCTCCCACATGGCTGACATGGCAAAGGAGATTGTTGAAGCTAATGGTTACTCTAATGTTGTAACAGTTTTGAAGGGGAAGATTGAAGAAATTGAACTTCCAGTTGCTAAAGTTGATATAATTATTTCAGAATGGATGGGATATTTCTTGTTGTTTGAGAATATGTTAAATTCGGTGCTCTATGCTCGTGACAAATGGCTTGTGGATGGCGGAGTTGTGCTACCAGACAAAGCATCCCTCCATCTCACTGCTATTGAAGATGCTGACTATAAAGAAGATAAAATTGAGTTTTGGAACAATGTATATGGATTTGACATGAGCTGCATCAAGAAGCAAGCCATAATGGAGCCTCTTGTTGACACAGTCGACCAGAATCAGATTGCTACAAACTGTCAGCTACTCAAGACAATGGATATCTCAAAGATGGCTCCTGGAGATGCTTCATTCACAGTACCTTTTAAGCTTGTAGCTGAACGTGACGACTATATTCATGCTCTTGTTGCATATTTTGATGTATCGTTTACAAAGTGTCATAAATTGATGGGCTTCTCTACAGGACCAAGATCACGAGCTACGCATTGGAAACAAACAGTCCTATACCTGGAAGATGTCTTGACCATTTGTGAGGGGGAGGCAATTGTGGGGAGCATGGCTGTTGCTCCAAATAAAAAAAATCCTCGGGATGTTGATATAATGCTCAAGTATTCATTGAATGGAAGGCGATGCAATGTTTCAAGGGTTCAGTACTACAAGATGCGTTGA 1131 0.4138 MGQRKNDNNINQCSSSKEDADMNNNHLRFEEAVDESSNLDQSMCDIEESDDKTSADYYFDSYSHFGIHEEMLKDTVRTKTYQNVIYQNKFLFKNKVVLDVGAGTGILSLFCAKAGAEHVYAVECSHMADMAKEIVEANGYSNVVTVLKGKIEEIELPVAKVDIIISEWMGYFLLFENMLNSVLYARDKWLVDGGVVLPDKASLHLTAIEDADYKEDKIEFWNNVYGFDMSCIKKQAIMEPLVDTVDQNQIATNCQLLKTMDISKMAPGDASFTVPFKLVAERDDYIHALVAYFDVSFTKCHKLMGFSTGPRSRATHWKQTVLYLEDVLTICEGEAIVGSMAVAPNKKNPRDVDIMLKYSLNGRRCNVSRVQYYKMR* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0031 376 Pfam Ribosomal protein L11 methyltransferase (PrmA) 91 167 - -
Gso1g0031 376 MobiDBLite consensus disorder prediction 1 20 - -
Gso1g0031 376 CDD AdoMet_MTases 97 197 - -
Gso1g0031 376 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 61 375 IPR029063 -
Gso1g0031 376 Gene3D - 200 376 - -
Gso1g0031 376 Gene3D Vaccinia Virus protein VP39 46 198 IPR029063 -
Gso1g0031 376 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 55 356 IPR025799 GO:0016274|GO:0018216
Gso1g0031 376 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 1.2-RELATED 36 376 - -
Gso1g0031 376 MobiDBLite consensus disorder prediction 1 21 - -
Gso1g0031 376 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 36 376 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0031 Gso-Chr1 434470 437441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0031 58 339 C2H2 Transcription Factor Family AT3G12270 39.803 6.10e-66 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0031 K11434 - gmx:100795951 761.14