Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso1g0013 ATGTCGAGGGTGAATTCAGAGAAGAAGCTGGGTGCAGGACGTGTGGTGGCTGTGGCAATTGAGAATAACAAGACAAGCCAACATGCTGCCAAATGGGCAGTGGACAATCTTCTTCCCAAAGACCAATGTCTCTTACTAATCCATGTTAGACAAAGACCATCTTCGGTTCCATTGTCGGATCATTTGAGCGAAGCTGTGGGCGACAACGAATCCAAGGAACTTTTTGAATCATTTCGAGTCTTCTGCAATAGAAAAAGTATACAATGCAAAGAAGTGCTGCTGGAGGACACGGATATATCTAAGGCATTAATAGACACCATTTCCACGAATACCATAGAGCTTCTTGTACTTGGGGCGCCCTCAAGGGGTGGCCTTGTTAGAAGATTTAGGACAACTGATGTCCCAAGCACTGTGTCCAAAGGGGCGCCACAATTCTGCACAGTTTATATAATTTCTAAAGGAAAAATCTCAAGTGTAAGATCTGCTACTGCTCCATTGGCTCCTAACAAAGCTGCCATTGCCGCTGCCGCTGCCGCCGCCGCTGCCACCACACCCCGTAACCAATTGCAGCCACAACAACAACCACACCCGCAGATAATGCGAAGTCCTGAAAGATTTTCAGATTCTCAGCCACCCCGCAACTACCCACCACGACCTACATCAGAGAGGCCAACAGCATTCGGGAGTCATGGGGCACACCACCCCATGATGGATGAAGATGATATCATATCACCGTTCACAAGGGCTGGGAAAACATACGAGCCTTCAAAATTTCAGGATTCTGATATATCATTCGTGAGCAGCGGAAGGCCAAGTGTTGAACGAATGTTCCCAACATTGTACGAGGATCAGGACAGTGCGAGTGGAATTGCCCTGGGTAGGTTCTCAGATTACGATGGTAGGAACAGCTTCGCTTCTTCCTACTCTTCACAATCGCAGGGCATCGATGACCACTCCTTCTCCTCGCAATCGAGGTTATCCGATTGCACCGACGACGTGGAATTCGAGATGAGGAGGCTGAAGCTGGAACTGAAGCAGACAATGGAAATGTACAGCTCTGTCTGCAAGGAAGCCATGACCGCAAAGCATAAGGCAATGGAGCTTCAACGTTGGAAAGTGGAAGAACAGAAGAAATTGGAAGACTCATCAATGTCGTCGTCCCCGGGTGAAGCTGTAACATCATCATCATCCATGGCACTGATGGAGATGGAGCAGGAAAAGATAAGAGAAGAAGCACTTCAAAAGATTGCAGCATTGGAAGCACAGAAGAGAATGAGTCTGCAGATGGAGAGGAAGAAGCCTGAGGAGAAGACCGTGAGTAGTTTTGGACACACTGCGAGGTACAGAAGATACACCATTGAGGAAATAGAAGAGGCAACAAACATGTTCTCGGAGTCTCTCAAGATCGGGGAAGGAGGGTATGGGCCAGTATACAGGTGCGAACTAGATTGCACCCAGGTTGCAATAAAGGTGTTGAAGCCAGATGCAGCACAAGGGAGAGAGCAGTTCCAGCAGGAGGTGGAAGTGCTGAGTTGCATAAGGCATCCAAACATGGTTCTTCTGCTGGGTGCGTGCCCAGAGTATGGGTGTCTGGTGTACGAGTACATGGCCAATGGAAGCTTGGACGACTGTCTGTTCCCAAGAGGAAAATCACGGCCACCTCTCCCATGGCAGCTGAGGTTCCAAATCGCTGCAGAGATAGCCACAGGTCTCCTTTTCCTTCATCAGACTAAACCGGAGCCACTGGTCCACCGCGACTTGAAACCCGGGAACATCCTCCTTGACCGCAACTACGTGAGCAAGATCAGTGACGTGGGCTTGGCCAGGCTTGTCCCTCCTTCGGTTGCAGACACTGTGACTCAGTATCGCATGACTTCCACAGCTGGAACATTCTGCTACATCGACCCGGAGTACCAGCAAACGGGCATGCTCGGAATCAAATCAGACATATACTCTCTCGGGATCATGCTTCTTCAATTGGTGACCGCCAAGCCTCCCATGGGTTTGACTCATCATGTTGGAAGGTCCATTGAGAAGGGCACTTTTGCAGAGATGCTTGACCCGGCCATTCCTGACTGGCCACTCGAACAGACCTTGCATTTCGCCAAGCTTTCCCTCGGATGCGCCGAGATGAGAAGAAAAGATCGACCAGATCTTGGAAAAGTTGTGTTGCCGGAGCTCAATAAGCTTAGGGCATTTGCTGAACAATGCATGTCACCTATGATGATGTTTGCACTTAGAAGTACTGGTGGTGGTGGTGGTGGTGCAGGATATGTTCCCAGAAACAGTAACTCTTCCGGACTTTCTTCTTCAACTCAAGACATGAGTGAAGTGTCTGGCTTCTCTGGATATGAAAGCCGCTCAAGCACATCATCGCTGGGGAGAATATGA 2391 0.4931 MSRVNSEKKLGAGRVVAVAIENNKTSQHAAKWAVDNLLPKDQCLLLIHVRQRPSSVPLSDHLSEAVGDNESKELFESFRVFCNRKSIQCKEVLLEDTDISKALIDTISTNTIELLVLGAPSRGGLVRRFRTTDVPSTVSKGAPQFCTVYIISKGKISSVRSATAPLAPNKAAIAAAAAAAAATTPRNQLQPQQQPHPQIMRSPERFSDSQPPRNYPPRPTSERPTAFGSHGAHHPMMDEDDIISPFTRAGKTYEPSKFQDSDISFVSSGRPSVERMFPTLYEDQDSASGIALGRFSDYDGRNSFASSYSSQSQGIDDHSFSSQSRLSDCTDDVEFEMRRLKLELKQTMEMYSSVCKEAMTAKHKAMELQRWKVEEQKKLEDSSMSSSPGEAVTSSSSMALMEMEQEKIREEALQKIAALEAQKRMSLQMERKKPEEKTVSSFGHTARYRRYTIEEIEEATNMFSESLKIGEGGYGPVYRCELDCTQVAIKVLKPDAAQGREQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLDDCLFPRGKSRPPLPWQLRFQIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDRNYVSKISDVGLARLVPPSVADTVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDIYSLGIMLLQLVTAKPPMGLTHHVGRSIEKGTFAEMLDPAIPDWPLEQTLHFAKLSLGCAEMRRKDRPDLGKVVLPELNKLRAFAEQCMSPMMMFALRSTGGGGGGAGYVPRNSNSSGLSSSTQDMSEVSGFSGYESRSSTSSLGRI* 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso1g0013 796 Coils Coil 402 422 - -
Gso1g0013 796 MobiDBLite consensus disorder prediction 183 209 - -
Gso1g0013 796 MobiDBLite consensus disorder prediction 759 796 - -
Gso1g0013 796 MobiDBLite consensus disorder prediction 382 396 - -
Gso1g0013 796 CDD STK_N 15 154 - -
Gso1g0013 796 ProSitePatterns Serine/Threonine protein kinases active-site signature. 582 594 IPR008271 GO:0004672|GO:0006468
Gso1g0013 796 SUPERFAMILY Protein kinase-like (PK-like) 439 723 IPR011009 -
Gso1g0013 796 Pfam Universal stress protein family 14 143 IPR006016 -
Gso1g0013 796 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 1 795 - -
Gso1g0013 796 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 16 130 - -
Gso1g0013 796 SMART serkin_6 463 733 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso1g0013 796 Pfam Protein kinase domain 465 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso1g0013 796 Gene3D - 16 196 - -
Gso1g0013 796 PANTHER OS02G0152300 PROTEIN 1 795 - -
Gso1g0013 796 ProSiteProfiles Protein kinase domain profile. 463 727 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso1g0013 796 MobiDBLite consensus disorder prediction 183 239 - -
Gso1g0013 796 MobiDBLite consensus disorder prediction 376 396 - -
Gso1g0013 796 Gene3D Phosphorylase Kinase; domain 1 432 535 - -
Gso1g0013 796 Gene3D Transferase(Phosphotransferase) domain 1 536 740 - -
Gso1g0013 796 MobiDBLite consensus disorder prediction 756 796 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso1g0013 Gso-Chr1 322150 326750 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso1g0013 16 738 Receptor kinase-like Gene Family AT5G35380 55.946 0.0 719
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Gso1g0013 Pkinase 1.9e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso1g0013 - - gmx:100785729 1485.32