Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso1g0012 | ATGGCACTCCTCACTTCTTTTATAACTTCATTCACATTATTATTATTATTTGTGATTATGATAACTAGTGCTTCAGACACAGGATCTCTCCTCAAATTCAGAGACTCCCTTGAAAACAACAATGCATTGTTGTCCTCATGGAATGCATCCATCCCTCCATGTTCGGGTTCATCCCACTGGCCTCGCGTTCAGTGTTACAAGGGACACGTGTCGGGGTTGAAGCTCGAGAACATGAGGCTCAAAGGTGTCATTGACGTCCAATCCCTCCTGGAGTTACCATATCTCAGAACCATAAGCCTCATGAACAACGACTTCGACACTGAATGGCCTGATATCAACAAAATTGTGGGTTTGAAGACCCTTTTCCTTTCAAATAACAATTTCTCCGGGGAGATTCCGGCCCAGGCTTTTCAGGGCATGCAGTGGTTGAAGAAGATTCATCTCTCAAACAACCAGTTCACAGGTCCTATTCCAACTTCCCTCGCATCCATGCCTAGGCTTATGGAGTTGAGGTTGGAGGGAAACCAATTCACTGGCCCCATTCCCAATTTTCAACATGCATTCAAATCATTTAGCGTAGCCAATAATCAATTGGAGGGAGAAATACCAGCCAGCCTCCATAACATGCCACCTTCTTCTTTCTCTGGCAATGAAGGGGTATGTGGAGCACCGCTAAGTGCATGCTCCTCCCCAAAAAAGAAATCAACTGCGAGTATTGTTGCGGCAGCGGTTCTTGTTATTGTAGCACTGATAGTGATTGGAGCAGTAATATTGTTAGTCCTGCATCAAAGAAGAAAACAAGCTGGGCTAGAAGTGTCTGCGGAGAATCCATCATCAATAATGTTCCAATCCCAACAGAAAGAAGCCTCGTCGTCAGATGAAGGAAGTCGGGGGTCGCCTACTAGCTCGAGCCACAGAAGCAGAAGCTTGAGGCTATTGTTTGTGAGGGATGACAGAGAGAAGTTTGATTATAATGAACTGTTTAGAGCCTCAGCAAAGATGTTGGGCAGTGGTTGTTTCAGCTCTTCCTACAAGGTTGCTCTGTTGGACGGACCAGAGATGGTGGTGAAGAGATTCAAGCAGATGAACAATGTAGGGAGGGAGGAGTTTGATGAGCACATGCGACGGATTGGAAGGTTGAATCATCCTAATCTGCTTCCTCTGGTCGCCTACTACTACAGAAAGGTGGAGAAACTCTTGGTTACTGACTTTGTTCACAATGGAAGCTTGGCCGTTCGCCTTCACGGATACCAAGCTCTAGGACAAGAAAGCCTGGATTGGGCAAGCCGGTTGAAGATAGTGAAAGGCATAGCAAAAGGAATTGAACATCTGTACAAGGAGATGCCAAGCCTAATTGCGGCACATGGACATCTAAAGTCCTCCAACGTTCTTCTGAGTGAATCTTTGGAGCCCATCCTGACAGATTATGGGTTGGGGCCAGTGATAAACCAGGACCTTGCACCTGAAATCATGGTTATCTACAAGTCCCCAGAGTATGTGCAGCATGGGCGCATCACAAAGAAGACTGATGTGTGGAGTCTTGGGATACTCATTCTGGAGATTCTCACTGGCAAGTTCCCTGCTAACCTTCTACAAGGCAAAGGGAGTGAGTTGAGTTTGGCAAATTGGGTGCATTCGGTTGTCCCCCAAGAGTGGACTAGAGAGGTGTTTGATAAGGACATGGATGGAACCAATAACAGTGAGGGGGAGATGGTCAAGCTTTTGAAGATTGCATTGGCTTGTTGTGAAGGAGATGTGGACAAGAGATGGGACTTAAAAGAAGCAGTAGAAAGAATTCATGAGGTCAACGAGGAGGAGGTGAAGTCATCACTTTCTCCATGGATGGTTAATTGA | 1854 | 0.4601 | MALLTSFITSFTLLLLFVIMITSASDTGSLLKFRDSLENNNALLSSWNASIPPCSGSSHWPRVQCYKGHVSGLKLENMRLKGVIDVQSLLELPYLRTISLMNNDFDTEWPDINKIVGLKTLFLSNNNFSGEIPAQAFQGMQWLKKIHLSNNQFTGPIPTSLASMPRLMELRLEGNQFTGPIPNFQHAFKSFSVANNQLEGEIPASLHNMPPSSFSGNEGVCGAPLSACSSPKKKSTASIVAAAVLVIVALIVIGAVILLVLHQRRKQAGLEVSAENPSSIMFQSQQKEASSSDEGSRGSPTSSSHRSRSLRLLFVRDDREKFDYNELFRASAKMLGSGCFSSSYKVALLDGPEMVVKRFKQMNNVGREEFDEHMRRIGRLNHPNLLPLVAYYYRKVEKLLVTDFVHNGSLAVRLHGYQALGQESLDWASRLKIVKGIAKGIEHLYKEMPSLIAAHGHLKSSNVLLSESLEPILTDYGLGPVINQDLAPEIMVIYKSPEYVQHGRITKKTDVWSLGILILEILTGKFPANLLQGKGSELSLANWVHSVVPQEWTREVFDKDMDGTNNSEGEMVKLLKIALACCEGDVDKRWDLKEAVERIHEVNEEEVKSSLSPWMVN* | 618 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso1g0012 | 617 | Pfam | Protein kinase domain | 332 | 597 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso1g0012 | 617 | SUPERFAMILY | Protein kinase-like (PK-like) | 332 | 601 | IPR011009 | - | |
Gso1g0012 | 617 | Gene3D | Ribonuclease Inhibitor | 189 | 229 | IPR032675 | - | |
Gso1g0012 | 617 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 | 10 | 607 | - | - | |
Gso1g0012 | 617 | Gene3D | Phosphorylase Kinase; domain 1 | 297 | 404 | - | - | |
Gso1g0012 | 617 | MobiDBLite | consensus disorder prediction | 280 | 305 | - | - | |
Gso1g0012 | 617 | Pfam | Leucine rich repeat N-terminal domain | 24 | 65 | IPR013210 | - | |
Gso1g0012 | 617 | Pfam | Leucine rich repeat | 117 | 177 | IPR001611 | GO:0005515 | |
Gso1g0012 | 617 | Gene3D | Ribonuclease Inhibitor | 25 | 188 | IPR032675 | - | |
Gso1g0012 | 617 | PANTHER | LRR RECEPTOR-LIKE KINASE | 10 | 607 | - | - | |
Gso1g0012 | 617 | Gene3D | Transferase(Phosphotransferase) domain 1 | 405 | 612 | - | - | |
Gso1g0012 | 617 | SUPERFAMILY | L domain-like | 24 | 209 | - | - | |
Gso1g0012 | 617 | ProSiteProfiles | Protein kinase domain profile. | 329 | 603 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso1g0012 | Gso-Chr1 | 317026 | 319989 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso1g0012 | 13 | 606 | Receptor kinase-like Gene Family | AT5G35390 | 50.968 | 0.0 | 602 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-III | Gso1g0012 | Pkinase | 5.1e-28 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso1g0012 | - | - | gmx:100785189 | 1139.79 |