Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g2207 ATGGCTTACTCCCACTCTCGTATCATGATTCTGTTGTTTCTGCTCTCTTTGGGCACAGCATCAGAAGAAAAGAAGACAACATACATAGTGCAAGTCCAGCAAGAAGCCAAGCCTTCCATTTTCCCAACGCACAGGCACTGGTACCAGTCTTCCCTTGCCCTTGCCGACAGCACAGCCTCCATTCTTCACACATACCAAACTGTCTTCCACGGTTTCTCTGCAAGGCTCTCCCCCGCCGAGGCAAACAGGCTTCAGTCACTCTCCCACGTCATAAGCCTCATTCCCGAACAGCTTCGCCAACTCCACACCACCCGCTCCCCTCAGTTCCTGGGCCTCAACACTGCCGACAGGGCTGGCCTTCTCAAGGAGACCGATTTCGGCTCCGATCTCGTCATCGGAGTCATCGACACCGGCATTTCCCCCGAGAGCCAGAGCTTCAACGACCGTCATCTCGCTCTCCCTCCCCCTAAGTGGAAGGGCCACTGCGTTGCTGCTAAAGACTTTCCCCCCACCTCCTGCAACCGGAAACTCATCGGAGCTCGCTACTTCTGCGCTGGCTACGAAGCCACCAACGGCAAAATGAACGACACTTTGGAGTCCCGTTCCCCGAGAGACTCCGACGGTCACGGCACCCACACGGCTTCCATCGCCGCCGGCAGGTACGTCTTCCCGGCCTCCACCATGGGCTACGCCAAAGGAATGGCCGCCGGGATGGCTCCCAAGGCTCGCCTCGCCGTCTACAAGGTCTGCTGGAACGCCGGCTGCTACGACTCCGACATCCTCGCCGCGTTCGACGCCGCCGTGGCCGACGGCGTCGACGTGGTCTCCCTCAGCGTCGGGGGCGTGGTGGTGCCCTACCACCTCGACGTCATCGCCGTCGGGGCCTTCGGAGCCTCCGAGGCTGGCGTCTTCGTGTCTGCCTCGGCGGGTAACGGCGGTCCCGGCGGCCTCACGGTGACCAATGTGGCACCCTGGGTCACCACTGTGGGCGCCGGAACCATAGACAGAGATTTCCCGGCGGATGTTGTGCTGGGGAACGGCAAGGTGATTGGCGGGATGAGTGTGTACGGTGGACCGGGTCTGACTCCAGGTCGGCTCTATCCTCTGGTGTATGCGGGTTCGGATGGTTACTCTTCCTCTCTTTGCTTGGAAGATTCGTTGGATCCCAAGTCTGTGAGGGGGAAGATTGTTGTGTGTGAGAGAGGCGTCAATTCAAGAGCAGCCAAAGGCCAAGTGGTGAAGAAAGCCGGAGGGGTTGGAATGGTGTTGACGAATGGACCCTTGGACGGGGAAGGCTTGGTGGCTGACTGCCAAGTCCTCCCGGCGACCTCCGTGGGTGCTGAAGGAGGGGACGAGCTTAGGAGATACATGGCATTCGCCGCACAGCTGCGGACACCAGCAACGGCAACCATAATATTCAAGGGCACAAGGCTCGGGATTAAACCAGCGCCCAAGGTGGCATCTTTTTCGGCCAGAGGGCCAAACCCGGAGTCCCCTGAGATTCTGAAGCCGGATGTGATAGCTCCCGGATTGAACATTCTGGCGGCTTGGCCTAGTACGCTTTCCCCTTCCGGGCTTCCCTCTGACGAGCGCAGGAGCCAGTTTAACATTCTGTCTGGCACTTCAATGGCTTGCCCCCACGTTTCTGGTTTGGCTGCTCTTCTGAAAGCGGCTCACCCTGACTGGAGTCCTGCCGCCATCAGATCTGCCCTCATCACCACTGCTTACACTCTAGACAACGGAGGAGGCCCTCTGCTGGATGAGTCCAATGCCAATGTTTCCTCCGTCTTCGATCATGGGGCTGGCCATGTTCATCCCGACAAGGCCATCAACCCTGGCCTGGTCTATGACATCTCTACCTACGATTATGTCGATTTCCTCTGCAATTCCAACTACACCTCCCACAACATCCGAGTTATCACCAGAAAGGCTGCTGTCTGCAGTGGGGCCAGGAGTGCTGGTCACTCTGGGAATCTCAATTACCCCTCCTTAGCTGCCGTCTTTCAACAGTATGGAAAGCAGCACATGTCCACCCACTTCATCAGAACTCTCACCAATGTTGGAGACCCCAACTCGCTCTACAAAGTCACTGTTGCACCCCCTCCCGGCACCGAGGTCACGGTGGTTCCGGACACGCTAGCTTTCAGGAGATTGGGTCAGAAATTGAACTTCCTTGTCAGGGTGCAAACCAGGGCAGTTAAGCTTTCCCCTGGGACCTCTACTGTCAAGACTGGTTCCATTGTTTGGTCGGATGCCAAGCACACTGTCACAAGTCCCTTGGTTGTCACCATGCAGCAACCTCTCTAA 2307 0.5769 MAYSHSRIMILLFLLSLGTASEEKKTTYIVQVQQEAKPSIFPTHRHWYQSSLALADSTASILHTYQTVFHGFSARLSPAEANRLQSLSHVISLIPEQLRQLHTTRSPQFLGLNTADRAGLLKETDFGSDLVIGVIDTGISPESQSFNDRHLALPPPKWKGHCVAAKDFPPTSCNRKLIGARYFCAGYEATNGKMNDTLESRSPRDSDGHGTHTASIAAGRYVFPASTMGYAKGMAAGMAPKARLAVYKVCWNAGCYDSDILAAFDAAVADGVDVVSLSVGGVVVPYHLDVIAVGAFGASEAGVFVSASAGNGGPGGLTVTNVAPWVTTVGAGTIDRDFPADVVLGNGKVIGGMSVYGGPGLTPGRLYPLVYAGSDGYSSSLCLEDSLDPKSVRGKIVVCERGVNSRAAKGQVVKKAGGVGMVLTNGPLDGEGLVADCQVLPATSVGAEGGDELRRYMAFAAQLRTPATATIIFKGTRLGIKPAPKVASFSARGPNPESPEILKPDVIAPGLNILAAWPSTLSPSGLPSDERRSQFNILSGTSMACPHVSGLAALLKAAHPDWSPAAIRSALITTAYTLDNGGGPLLDESNANVSSVFDHGAGHVHPDKAINPGLVYDISTYDYVDFLCNSNYTSHNIRVITRKAAVCSGARSAGHSGNLNYPSLAAVFQQYGKQHMSTHFIRTLTNVGDPNSLYKVTVAPPPGTEVTVVPDTLAFRRLGQKLNFLVRVQTRAVKLSPGTSTVKTGSIVWSDAKHTVTSPLVVTMQQPL* 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g2207 768 CDD Peptidases_S8_3 100 576 IPR034197 -
Gso19g2207 768 Gene3D - 627 765 - -
Gso19g2207 768 SUPERFAMILY Protease propeptides/inhibitors 27 91 - -
Gso19g2207 768 Pfam Peptidase inhibitor I9 27 102 IPR010259 -
Gso19g2207 768 Gene3D Peptidase S8/S53 domain 129 623 IPR036852 GO:0004252|GO:0006508
Gso19g2207 768 Pfam Fibronectin type-III domain 658 762 IPR041469 -
Gso19g2207 768 ProSitePatterns Serine proteases, subtilase family, serine active site. 540 550 IPR023828 -
Gso19g2207 768 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 16 102 IPR037045 -
Gso19g2207 768 CDD PA_subtilisin_like 341 458 - -
Gso19g2207 768 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.5 10 768 - -
Gso19g2207 768 Pfam PA domain 367 453 IPR003137 -
Gso19g2207 768 Gene3D - 335 479 - -
Gso19g2207 768 PRINTS Subtilisin serine protease family (S8) signature 127 146 IPR015500 -
Gso19g2207 768 PRINTS Subtilisin serine protease family (S8) signature 205 218 IPR015500 -
Gso19g2207 768 PRINTS Subtilisin serine protease family (S8) signature 539 555 IPR015500 -
Gso19g2207 768 Pfam Subtilase family 127 579 IPR000209 GO:0006508|GO:0008236
Gso19g2207 768 SUPERFAMILY PA domain 367 446 IPR046450 -
Gso19g2207 768 ProSiteProfiles Serine proteases, subtilase domain profile. 106 610 - -
Gso19g2207 768 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED 10 768 - -
Gso19g2207 768 SUPERFAMILY Subtilisin-like 101 614 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g2207 Gso-Chr19 50529148 50531832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g2207 27 768 Subtilisin-like Serine Gene Family AT3G14240 73.965 0.0 1147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g2207 - - gmx:100813247 1484.54