Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g2206 ATGTGGTGGAGATCAGCATCATTCATCATGGACAGGCAGCAGCAGCAGAACCAGGGGGACTCCTCAAACCCTAATATCTCTGCCTACTATGAGACCAGAGCGGCGCACCACGGCGTGGTCACCAGCGACTGGCTGGCCCAGGCTCAGGCCGCTATTGGCCCCGAACCTCAACCTCAACCTCAACTCAGCCCCGATCCTGACAAGCCCTTCAGTGTCATCGACCAGTTTAACAGCTGGCGGAAACAGCCCCATTTGGCCGAGGCCGTCGCCGCCATTCGCGCCCTGGCCGCCGTCATAAGATCCAGCCAGGCTACCACCATGATGCAGCTCGAAATCGAGCTCAAGAAGGCCTCCGATTCTCTCAAATCTTGGGATACCTCCTCTATCTCTTTGACAGCCGGCTGTGATCTCTTTATGCGATATGTCACTCGCACTTCTGCTTTAGAGTATGAAGACTTCAATTCCGCTAAGTCTCGCTTGATCGAACGTGCTGAGAAGTTTGGGGAAATCTCCTACAAGGCCCGCAAAGTTATTGCAATGTTGAGTCAGGATTTTATATTTGATGGCTGTACAATTTTGGTTCATGGTTTTTCCAGAGTCGTCTTTGAAGTCCTGAAACTTGCTGCACAAAATAACAAACTATTTCGGGTCTTCTGCACTGAGGGAAGACCAGACCGAACAGGTTTGCGGTTGTCGAATGAGCTGGCCAAGCTTGATGTTCCTGTGAAACTTCTAATAGATTCTGCTGTTGCATATACTATGGATGAGGTGGACATGGTTTTTGTGGGTGCAGATGGAGTTGTCGAAAGTGGGGGCATAATCAACATGATGGGGACCTATCAAATAGCATTGGTTGCACACAGTATGAATAAACCAGTTTATGTCGCTGCTGAGAGCTACAAGTTTGCCCGCCTTTACCCTCTCGACCAAAAGGATTTAGCCCCTGCGTTACGGCCTATTGATTTTGGCGTACCTATTCCATCCAAGGTTGAGGTTGAAAGGTCCGCGCGGGACTACACCCCTCCTCAATACCTGACTCTGCTTTTCACAGATTTAGGTGTTCTTACTCCATCTGTCGTTAGTGATGAGCTTATCCAGCTATACTTATAG 1110 0.4955 MWWRSASFIMDRQQQQNQGDSSNPNISAYYETRAAHHGVVTSDWLAQAQAAIGPEPQPQPQLSPDPDKPFSVIDQFNSWRKQPHLAEAVAAIRALAAVIRSSQATTMMQLEIELKKASDSLKSWDTSSISLTAGCDLFMRYVTRTSALEYEDFNSAKSRLIERAEKFGEISYKARKVIAMLSQDFIFDGCTILVHGFSRVVFEVLKLAAQNNKLFRVFCTEGRPDRTGLRLSNELAKLDVPVKLLIDSAVAYTMDEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAESYKFARLYPLDQKDLAPALRPIDFGVPIPSKVEVERSARDYTPPQYLTLLFTDLGVLTPSVVSDELIQLYL* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g2206 369 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 25 369 - -
Gso19g2206 369 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 25 369 - -
Gso19g2206 369 Pfam Initiation factor 2 subunit family 84 357 IPR000649 GO:0044237
Gso19g2206 369 SUPERFAMILY NagB/RpiA/CoA transferase-like 84 368 IPR037171 -
Gso19g2206 369 Gene3D - 172 369 IPR042529 -
Gso19g2206 369 Gene3D - 69 170 IPR042528 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g2206 Gso-Chr19 50524146 50526460 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g2206 1 369 Eukaryotic Initiation Factors Gene Family AT1G53880 78.866 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g2206 K03239 - gmx:100808764 703.745