Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g2201 ATGGTAGAGTTTCAAAGGTTGTTGGTGTGCATCACCACCTGCATTCTATGTTGGATGCCCAATGGTGCCACTGCCGCCACAGATCCAAATGATGCTGCTGCTGTGAGATTTTTGTTTCAAAATATGAACTCACCACCCCAGCTAGGTTGGCCTCCTAATGGTGATGATCCATGTGGACAATCTTGGAAAGGCATTACTTGCTCTGGCAATCGTGTTACAGAGATTAAGTTATCTAATCTTGGACTAACTGGATCGTTGCCTTATGGATTACAAGTCTTGACATCTTTGACCTACGTAGACATGAGTAGCAACAGTCTTGGTGGCAGCATACCGTACCAACTTCCTCCATATTTGCAGCACTTAAATCTTGCTTATAACAACATCACAGGGACAGTACCTTATTCGATTTCTAACTTGACTGCTCTTACTGACCTGAATTTTAGTCACAATCAGCTCCAGCAAGGACTGGGTGTTGACTTTCTTAATCTTTCTACTCTCTCCACATTGGATCTCTCTTTCAATTTTCTAACAGGTGACCTCCCTCAGACTATGAGCTCACTTTCACGCATAACCACCATGTATCTGCAAAATAACCAGTTTACAGGCACTATTGATGTCCTTGCTAATCTGCCTCTGGATAATCTGAATGTGGAAAATAATAATTTTACTGGATGGATACCAGAACAGTTGAAGAACATAAACCTACAGACCGGTGGTAATGCATGGAGCTCAGGGCCTGCACCCCCACCTCCTCCTGGGACACCTCCAGCACCTAAAAGCAACCAGCACCACAAGTCTGGTGGTGGAAGCACCACCCCCTCAGATACTGCCACTGGCAGCAGCTCAATTGACGAGGGAAAAAAATCTGGTACAGGAGGTGGTGCCATAGCCGGAATTGTGATCTCTGTCATAGTTGTGGGGGCAATAGTAGCATTCTTTCTGGTGAAGAGAAAATCCAAGAAGTCATCTTCTGATTTAGAAAAGCAGGATAATCAGTCCTTTGCTCCACTTCCTTCAAATGAAGTGCATGAAGAAAAGTCCATGCAAACTTCCTCTGTAACAGACTTGAAGACGTTTGATACTTCTGCCTCAATAAATCTTAAACCCCCACCTATTGACCGTCATAAATCATTTGATGATGAAGAATTCTCCAAGAGGCCCACAATTGTGAAGAAGACTGTAACAGCTCCTGCAAATGTGAAATCATATTCTATTGCTGAACTGCAGATTGCTACTGGCAGCTTCAGTGTGGATCACCTTGTTGGCGAGGGATCTTTTGGGCGTGTTTACCGTGCTCAATTTGATGATGGACAGGTTCTTGCAGTGAAGAAGATAGATTCATCTATCCTTCCCAATGATTTGACAGATGATTTTATACAAATAATTTCAAACATCTCCAATTTACATCATCCAAATGTGACAGAGCTTGTAGGTTATTGCTCAGAGTATGGACAACACCTCTTGGTCTATGAGTTTCATAAAAATGGATCACTGCATGACTTCCTTCACCTATCAGATGAATATAGTAAACCATTGATATGGAATTCCCGTGTCAAGATTGCTTTGGGGACTGCACGTGCTCTAGAGTACCTACATGAAGTTAGTTCGCCATCAGTTGTTCATAAGAATATTAAGTCAGCCAACATATTACTTGATACAGAACTTAATCCTCATCTTTCAGATAGTGGATTGGCAAGTTATATTCCAAATGCCGACCAGATATTGAATCATAATGTTGGATCTGGATATGATGCACCTGAAGTTGCCTTGTCTGGTCAGTATACTTTGAAAAGTGATGTCTACAGCTTTGGAGTCGTCATGTTGGAACTTCTCAGTGGACGGAACCCTTTTGATAGCTCAAGGCCAAGATCTGAGCAGTCTTTGGTTCGATGGGCAACACCTCAACTCCATGATATTGATGCATTGGCTAAAATGGTTGATCCTGCAATGAAAGGGTTATATCCTGTTAAGTCTCTTTCTCGATTTGCCGATGTTATTGCTCTTTGCGTTCAGCCGGAGCCAGAATTCCGACCACCGATGTCAGAAGTGGTTCAAGCACTGGTGCGACTAGTGCAGCGAGCTAACATGAGCAAGCGAACATTTAGTAGTAGTGATCATGGAGGATCCCAACGAGGGAGTGATGAGCCAGTTCTACGAGACATCTAA 2166 0.4303 MVEFQRLLVCITTCILCWMPNGATAATDPNDAAAVRFLFQNMNSPPQLGWPPNGDDPCGQSWKGITCSGNRVTEIKLSNLGLTGSLPYGLQVLTSLTYVDMSSNSLGGSIPYQLPPYLQHLNLAYNNITGTVPYSISNLTALTDLNFSHNQLQQGLGVDFLNLSTLSTLDLSFNFLTGDLPQTMSSLSRITTMYLQNNQFTGTIDVLANLPLDNLNVENNNFTGWIPEQLKNINLQTGGNAWSSGPAPPPPPGTPPAPKSNQHHKSGGGSTTPSDTATGSSSIDEGKKSGTGGGAIAGIVISVIVVGAIVAFFLVKRKSKKSSSDLEKQDNQSFAPLPSNEVHEEKSMQTSSVTDLKTFDTSASINLKPPPIDRHKSFDDEEFSKRPTIVKKTVTAPANVKSYSIAELQIATGSFSVDHLVGEGSFGRVYRAQFDDGQVLAVKKIDSSILPNDLTDDFIQIISNISNLHHPNVTELVGYCSEYGQHLLVYEFHKNGSLHDFLHLSDEYSKPLIWNSRVKIALGTARALEYLHEVSSPSVVHKNIKSANILLDTELNPHLSDSGLASYIPNADQILNHNVGSGYDAPEVALSGQYTLKSDVYSFGVVMLELLSGRNPFDSSRPRSEQSLVRWATPQLHDIDALAKMVDPAMKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANMSKRTFSSSDHGGSQRGSDEPVLRDI* 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g2201 721 Gene3D Phosphorylase Kinase; domain 1 378 492 - -
Gso19g2201 721 MobiDBLite consensus disorder prediction 236 291 - -
Gso19g2201 721 MobiDBLite consensus disorder prediction 698 721 - -
Gso19g2201 721 PANTHER OS01G0253100 PROTEIN 21 715 IPR045271 GO:0004714|GO:0006468
Gso19g2201 721 MobiDBLite consensus disorder prediction 259 287 - -
Gso19g2201 721 PANTHER STRUBBELIG-RECEPTOR FAMILY 6 PROTEIN 21 715 - -
Gso19g2201 721 Gene3D Ribonuclease Inhibitor 29 250 IPR032675 -
Gso19g2201 721 MobiDBLite consensus disorder prediction 321 354 - -
Gso19g2201 721 Pfam Leucine rich repeat 116 152 IPR001611 GO:0005515
Gso19g2201 721 ProSiteProfiles Protein kinase domain profile. 415 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso19g2201 721 Pfam Protein tyrosine and serine/threonine kinase 418 687 IPR001245 GO:0004672|GO:0006468
Gso19g2201 721 Gene3D Transferase(Phosphotransferase) domain 1 494 709 - -
Gso19g2201 721 SUPERFAMILY L domain-like 27 232 - -
Gso19g2201 721 SUPERFAMILY Protein kinase-like (PK-like) 397 687 IPR011009 -
Gso19g2201 721 Pfam Leucine rich repeat N-terminal domain 39 68 IPR013210 -
Gso19g2201 721 MobiDBLite consensus disorder prediction 244 258 - -
Gso19g2201 721 ProSitePatterns Protein kinases ATP-binding region signature. 421 444 IPR017441 GO:0005524
Gso19g2201 721 MobiDBLite consensus disorder prediction 328 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g2201 Gso-Chr19 50489847 50498192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g2201 1 700 Strubbelig Receptor Gene Family AT1G53730 65.771 0.0 850
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Gso19g2201 PK_Tyr_Ser-Thr 1.6e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g2201 - - gmx:100807707 1375.15