Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g2191 ATGGGTGAAGTGCCGGCTGTGATGCAGGCGACGCAGGGGGAACAGAGCAACAATGCCTCCGCTGTTCATTGGGAGCGCTTTCTGCCTCGGATGGTGCTTCGGGTCTTGCTTGTCGAAGCTGATGATTCTACTCGACAGATCATTGCTGCACTTCTCCGTAAATGCGGTTACAAAGTTGTTGCATTTTGTGATGGCTTAAAGGCATGGGAGACATTGAAGAACAAAGCATTTGACTTAGATCTCATATTAACAGAAGTGGATTTGCCATCAATATCTGGATTTTCACTTCTTACTTTAATCATGGAGCATGACATTTGCAAAAACATTCCTGTCATAATGATGTCTTCTCATGATTCAGTAAGCATGGTGTTTAAATGCATGTTAAAAGGTGCAGCTGATTTTCTTATAAAACCTGTTCGCAAGAATGAGCTAAGAAACTTGTGGCAGCATGTATGGAGAAGGCACGCCATAAGCAGGCCTCCTCAAAATTTAACACTGCCGGAGATTGAACTTGGTTTTGCTGCAGAAAACCATGCTGCAAGCAATGACTCTAGTGGTTCTGTGGCTTCTACACCAAAAGATGATGAATGCAGTGAGAAAACAAGTGAGGCTCATAGCACTTGCCCATCGCCATTTTTGGAAGCTGAGAGTACCTACATGGAAAATATGCAGGATATATTGCAGCTGAAGAGCTCTTCAAATTTGAGCAATATTGACACAGTGAAGCATGAAAACTCTACCAAATGTGAAAGGGAGTCAGATAAGCATAATGATGAAGCTGGAGCTTGTATTACAGAGAAATCACTGTTTATATTGGAAGATGCAAGGTGCAACAAAACTTTTAAACCAACAGGTTTAAGGCTAGGTCAAAGCTATGAGTGCCATGAAACGAGAAATCAAGATGAAGTTCTAAGAATAGAGTTGATAAAATCCAATCCTGAAATTAATACAGATATTCATAGATGCAGTGATGAACTGGTAGATCCTTCTACTGGCGCCATTGACTTGATTGCTACATTCAAGAATCTTCCAAAGAGCACTGATGAAAAATGTAGTTTCAGTAGTGGTAACACTGCCAAGTTTGATTTTGATACACAATTGGAACTTTCTTTAAGAAGAGATTTTCCTGGAAGCTCATGTAAAGCTGCATTCAAGGAAAGGCAAATATTGAACCATTCAAATGCTTCTGCCTTTTCTAGGTATAGTAATAGTAAGTTGTTGCAGCCCCTTTTTCCAACACCATCAACTATCTCTGCTAAATTAACCAATGCCAGTCAGAATTCTCATGAATCCCTTAAATTATCAAAAAATACATCTACTTCTCATCAATATAGTGAAAAAAGTCAAAATCAGGAGGAGAAAATCATCACTTCAGTCATTGGTCAGTCTGGACAAGTTGATCCAAAATTACCAAACAGTCAACTTGGATTGTTTCCTGCTACAGGGGTTACTTCTGATCACAAGTCTAAAGGAAATGGAAATGTCTTCCCTTCTAAGCTTTATGCAAAATCAGGTGTCCATCCCATATCGACTCCAAAATCAGTGTGCCAGAAAGAGAGTTCTCCATTTCCCACAAGCACTTCCTCCCAGTCCAATCCTCAAAGTCACAACTCAGAACGTCATCACTGGTTGGAAGATGCAACCCATGCTTCTGATCAAAATGTAAATGATCAAAGCAATTTGGAATGTGAGACACATGACTCTCCTGCTGCTAGTCAGAGTGCTGGTCCTAGTTTTTTCCATGACACAGCAAATCATAATAGTAGTGGTGTATACAGAAGTGATGGAAATGCTACTTCAGCTAAGGTAGCCAAGGAGAGCCATGAAATTTTTATTGATAGTGGTCAACGCAGTTATGATGGATTCATAGGGACAGATTCTCATCGCACTAGCCAACGAGAAGCAGCTCTAACAAAGTTTCGACTGAAGCGGAAAGACAGATGCTATGAGAAAAAGGTGCGATATCAAAGCCGGAAGAGATTGGCAGAGCAGCGCCCTCGCGTGAAAGGGCAATTTGTTCGCCAAGTACACGATGATCATCCAGTAGCAGATGTGGGTGGTGGTTCCTGA 2070 0.4111 MGEVPAVMQATQGEQSNNASAVHWERFLPRMVLRVLLVEADDSTRQIIAALLRKCGYKVVAFCDGLKAWETLKNKAFDLDLILTEVDLPSISGFSLLTLIMEHDICKNIPVIMMSSHDSVSMVFKCMLKGAADFLIKPVRKNELRNLWQHVWRRHAISRPPQNLTLPEIELGFAAENHAASNDSSGSVASTPKDDECSEKTSEAHSTCPSPFLEAESTYMENMQDILQLKSSSNLSNIDTVKHENSTKCERESDKHNDEAGACITEKSLFILEDARCNKTFKPTGLRLGQSYECHETRNQDEVLRIELIKSNPEINTDIHRCSDELVDPSTGAIDLIATFKNLPKSTDEKCSFSSGNTAKFDFDTQLELSLRRDFPGSSCKAAFKERQILNHSNASAFSRYSNSKLLQPLFPTPSTISAKLTNASQNSHESLKLSKNTSTSHQYSEKSQNQEEKIITSVIGQSGQVDPKLPNSQLGLFPATGVTSDHKSKGNGNVFPSKLYAKSGVHPISTPKSVCQKESSPFPTSTSSQSNPQSHNSERHHWLEDATHASDQNVNDQSNLECETHDSPAASQSAGPSFFHDTANHNSSGVYRSDGNATSAKVAKESHEIFIDSGQRSYDGFIGTDSHRTSQREAALTKFRLKRKDRCYEKKVRYQSRKRLAEQRPRVKGQFVRQVHDDHPVADVGGGS* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g2191 689 Gene3D - 31 256 - -
Gso19g2191 689 ProSiteProfiles CCT domain profile. 633 675 IPR010402 GO:0005515
Gso19g2191 689 PANTHER TWO-COMPONENT RESPONSE REGULATOR 23 229 IPR045279 GO:0009736
Gso19g2191 689 PANTHER TWO-COMPONENT RESPONSE REGULATOR 233 672 IPR045279 GO:0009736
Gso19g2191 689 Pfam Response regulator receiver domain 35 146 IPR001789 GO:0000160
Gso19g2191 689 PANTHER PRR RESPONSE REGULATOR 23 229 - -
Gso19g2191 689 PANTHER PRR RESPONSE REGULATOR 233 672 - -
Gso19g2191 689 SUPERFAMILY CheY-like 33 164 IPR011006 -
Gso19g2191 689 MobiDBLite consensus disorder prediction 427 452 - -
Gso19g2191 689 MobiDBLite consensus disorder prediction 554 595 - -
Gso19g2191 689 SMART REC_2 33 148 IPR001789 GO:0000160
Gso19g2191 689 Pfam CCT motif 633 675 IPR010402 GO:0005515
Gso19g2191 689 ProSiteProfiles Response regulatory domain profile. 34 152 IPR001789 GO:0000160
Gso19g2191 689 MobiDBLite consensus disorder prediction 511 539 - -
Gso19g2191 689 MobiDBLite consensus disorder prediction 180 210 - -
Gso19g2191 689 CDD psREC_PRR 35 138 - -
Gso19g2191 689 MobiDBLite consensus disorder prediction 511 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g2191 Gso-Chr19 50355681 50360655 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g2191 632 677 Response Regulator Gene Family AT5G24470 89.130 2.11e-20 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Gso19g2191 Response_reg 4.5e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g2191 K12130 - gmx:100809490 1367.44