Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g2185 ATGCCGGAGATGGAGATGAGCATATGTGTGAATGGAGAATCCCAAGTCCCTCCAGGCTTCCGGTTTCATCCAACCGAAGAGGAACTGTTGCAGTACTATTTGAGGAAGAAGATGTCCAACGAGAAGATCGACCTCGACGTGATTCGCGATGTTGATCTCAACAGGCTCGAACCATGGGACATACAAGAGATGTGCAAAATAGGAAGCAGCCCACAAAACGATTGGTACTTGTTCAGCCACAAGTACAAGAAGTACCCCACGGGAAGCCGCACAAACCGCGCCACCAGTGTTGGGTTCTGGAAGGCCACGGGGCGCGACAAGGTCATATATAGCAACGGGAAGATAATTGGAATGAGAAAAACATTGGTTTTCTACAAAGGGCGTGCCCCCAATGGCCAAAAGTCTGATTGGATCATGCATGAATACAGGCTAGACGACATTAATAACACCAATGAGATGGAACACGGGTGGGTGGTCTGTAGAGTTTTCAAGAAGAAGAACGTCCCTCTCAAAACACTAGATAGCCCAAAATCCATGACCATGAATATGGTCACAGAAAGCGACTACTGTGGTGGCTTCACTAGCTGGGAATCCCTTGATCAGCTTGTGGCATCACAACTGAATGGACAAACTGAGACATATTGCAGTGATTTGCAATTCCCCGCATTTCTATCATCCTCATACATTGCTACAACAACAACAACAACAACACACATTGCTCCCACAATACAGGATTACCCCAGCTACGACATTGACCTGTGGAACCACTGTGCTTCGTGTCCAACACTCCAAATGTAA 798 0.4699 MPEMEMSICVNGESQVPPGFRFHPTEEELLQYYLRKKMSNEKIDLDVIRDVDLNRLEPWDIQEMCKIGSSPQNDWYLFSHKYKKYPTGSRTNRATSVGFWKATGRDKVIYSNGKIIGMRKTLVFYKGRAPNGQKSDWIMHEYRLDDINNTNEMEHGWVVCRVFKKKNVPLKTLDSPKSMTMNMVTESDYCGGFTSWESLDQLVASQLNGQTETYCSDLQFPAFLSSSYIATTTTTTTHIAPTIQDYPSYDIDLWNHCASCPTLQM* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g2185 265 PANTHER NAC DOMAIN-CONTAINING PROTEIN 12 6 185 - -
Gso19g2185 265 ProSiteProfiles NAC domain profile. 16 165 IPR003441 GO:0003677|GO:0006355
Gso19g2185 265 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 6 185 - -
Gso19g2185 265 Pfam No apical meristem (NAM) protein 17 144 IPR003441 GO:0003677|GO:0006355
Gso19g2185 265 SUPERFAMILY NAC domain 6 165 IPR036093 GO:0003677|GO:0006355
Gso19g2185 265 Gene3D NAC domain 25 169 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g2185 Gso-Chr19 50321620 50322718 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g2185 1 176 NAC Transcription Factor Family AT2G46770 73.298 1.29e-99 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gso19g2185 NAM 6.1e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g2185 - - gmx:100808411 553.903