Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g2177 ATGACAAGCCACATTGACGACAACCTCTGGATAATAGCCCTGACCTCGAAATGCACCCAAGAAAACCTTGCATGGGTCCTTTTGATCATGGGCTCACTCTGGTTAACCATGACTTTCTATTACTGGTCACACCCCGGTGGTCCTGCCTGGGGCAAGTACTACACCTACTCTCCCCCCCTTTCAATCATTCCCGGTCCCAAAGGCTTCCCTCTTATTGGAAGCATGGGCCTCATGATTTCCCTGGCCCATCACCGTATCGCAGCCGCGGCCGCCACATGCAGAGCCAAGCGCCTCATGGCCTTTAGTCTCGGCGACACACGTGTCATCGTCACGTGCCACCCCGACGTGGCCAAGGAGATTCTCAACAGCTCCGTCTTCGCCGATCGTCCCGTCAAAGAATCCGCATACAGCCTCATGTTTAACCGCGCCATCGGCTTCGCCTCTTACGGAGTTTACTGGCGAAGCCTCAGGAGAATCGCCTCTAATCACTTCTTCTGCCCCCGCCAGATAAAAGCCTCTGAGCTCCAACGCTCTCAAATCGCCGCCCAAATGGTTCACATCCTAAATAACAAGCGCCACCGCAGCTTACGTGTTCGCCAAGTGCTGAAAAAGGCTTCGCTCAGTAACATGATGTGCTCCGTGTTTGGACAAGAGTATAAGCTGCACGACCCAAACAGCGGAATGGAAGACCTTGGAATATTAGTGGACCAAGGTTATGACCTGTTGGGCCTGTTTAATTGGGCCGACCACCTTCCTTTTCTTGCACATTTCGACGCCCAAAATATCCGGTTCAGGTGCTCCAACCTCGTCCCCATGGTGAACCGTTTCGTCGGCACAATCATCGCTGAACACCGAGCTAGTAAAACCGAAACCAATCGTGATTTTGTTGACGTCTTGCTCTCTCTCCCGGAACCTGATCAATTATCAGACTCCGACATGATCGCTGTACTTTGGGAAATGATATTCAGAGGAACGGACACGGTAGCGGTTTTGATAGAGTGGATACTCGCGAGGATGGCGCTTCATCCTCATGTGCAGTCCAAAGTTCAAGAGGAGCTAGATGCAGTTGTCGGAAAAGCACGCGCCGTCGCAGAGGATGACGTGGCAGTGATGACGTACCTACCAGCGGTGGTGAAGGAGGTGCTGCGGCTGCACCCGCCGGGCCCACTTCTATCATGGGCCCGCTTGTCCATCAATGATACGACCATTGATGGGTATCACGTACCTGCGGGGACCACTGCTATGGTCAACATGTGGGCTATTTGCAGGGACCCACACGTGTGGAAGGACCCACTCGAATTTATGCCCGAGAGGTTTGTCACTGCGGGTGGAGATGCCGAATTTTCGATACTCGGGTCGGATCCAAGACTTGCTCCATTTGGGTCGGGTAGGAGAGCGTGCCCAGGGAAGACTCTTGGATGGGCTACGGTGAACTTTTGGGTGGCGTCGCTCTTGCATGAGTTCGAATGGGTACCGTCTGATGAGAAGGGTGTTGATCTGACGGAGGTGCTGAAGCTCTCTAGTGAAATGGCTAACCCTCTCACCGTCAAAGTGCGCCCCAGGCGTGGATAA 1572 0.5363 MTSHIDDNLWIIALTSKCTQENLAWVLLIMGSLWLTMTFYYWSHPGGPAWGKYYTYSPPLSIIPGPKGFPLIGSMGLMISLAHHRIAAAAATCRAKRLMAFSLGDTRVIVTCHPDVAKEILNSSVFADRPVKESAYSLMFNRAIGFASYGVYWRSLRRIASNHFFCPRQIKASELQRSQIAAQMVHILNNKRHRSLRVRQVLKKASLSNMMCSVFGQEYKLHDPNSGMEDLGILVDQGYDLLGLFNWADHLPFLAHFDAQNIRFRCSNLVPMVNRFVGTIIAEHRASKTETNRDFVDVLLSLPEPDQLSDSDMIAVLWEMIFRGTDTVAVLIEWILARMALHPHVQSKVQEELDAVVGKARAVAEDDVAVMTYLPAVVKEVLRLHPPGPLLSWARLSINDTTIDGYHVPAGTTAMVNMWAICRDPHVWKDPLEFMPERFVTAGGDAEFSILGSDPRLAPFGSGRRACPGKTLGWATVNFWVASLLHEFEWVPSDEKGVDLTEVLKLSSEMANPLTVKVRPRRG* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g2177 523 Pfam Cytochrome P450 64 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g2177 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
Gso19g2177 523 SUPERFAMILY Cytochrome P450 63 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g2177 523 PANTHER CYTOCHROME P450 78A7-RELATED 1 522 - -
Gso19g2177 523 PRINTS P450 superfamily signature 323 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g2177 523 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g2177 523 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g2177 523 Gene3D Cytochrome P450 59 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g2177 523 PRINTS E-class P450 group I signature 312 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g2177 523 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g2177 523 PRINTS E-class P450 group I signature 375 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g2177 523 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g2177 523 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g2177 523 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso19g2177 523 PANTHER CYTOCHROME P450 78A6 1 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g2177 Gso-Chr19 50222412 50224526 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g2177 1 522 Cytochrome P450 AT2G46660 65.356 0.0 690
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g2177 K20619 - gmx:100799906 1045.8