Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g2176 ATGGCCTCAAATCCCAAAACTTTGACCTTTGAGGAGGTAGCTAAGCACAACAACAAAAAGGATTGCTGGATTATTATCAATGGAAAGGTGTATGATATCACACCATTTTTGGATGAGCATCCAGGAGGTGATGAAGTTTTGCTGACGTCAACAGGGAAGGATGCCACCATTGATTTTGAAGATGTGGGCCACAGTGATTCTGCTATAGAAATGATGGAAAAATACTTCATTGGGAAGGTTGACACTTCCACTCTTCCACCCAAAGTTAGCCATAGTCTGCCACAACCTACACAAACACATGGCGCTGGCAATCAATCTTCTGGATTTGTTGTAAAGATCTTGCAATTCCTGTTGCCATTGTTGATACTGGGCCTCGCATTTGCCCTGCAGTATTATGGCCAAAAGAAGCATGCTAGCACCTCATGA 426 0.4319 MASNPKTLTFEEVAKHNNKKDCWIIINGKVYDITPFLDEHPGGDEVLLTSTGKDATIDFEDVGHSDSAIEMMEKYFIGKVDTSTLPPKVSHSLPQPTQTHGAGNQSSGFVVKILQFLLPLLILGLAFALQYYGQKKHASTS* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g2176 141 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Gso19g2176 141 Pfam Cytochrome b5-like Heme/Steroid binding domain 9 80 IPR001199 -
Gso19g2176 141 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Gso19g2176 141 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Gso19g2176 141 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Gso19g2176 141 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Gso19g2176 141 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Gso19g2176 141 Gene3D - 2 84 IPR036400 -
Gso19g2176 141 PANTHER CYTOCHROME B5 ISOFORM C 1 136 - -
Gso19g2176 141 SMART Cyt_b5_2 8 81 IPR001199 -
Gso19g2176 141 PANTHER CYTOCHROME B5 1 136 - -
Gso19g2176 141 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 4 87 IPR036400 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g2176 Gso-Chr19 50208187 50213066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g2176 1 135 NADPH P450 reductases AT5G53560 60.000 3.97e-60 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g2176 K23490 - gmx:100306380 269.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g2176 19 50208187 50213066 Gso3g2215 3 47295859 47299648 GST
Gso19g2176 19 50208187 50213066 Gso7g0466 7 4620770 4625933 PCT
Gso19g2176 19 50208187 50213066 Gso16g0172 16 1983285 1988206 PCT
Gso7g0466 7 4620770 4625933 Gso19g2176 19 50208187 50213066 PCT
Gso16g0172 16 1983285 1988206 Gso19g2176 19 50208187 50213066 PCT