Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g2125 ATGGGAAACAGTGAGGAAGAGAAATCTACCAAGACTGAAAAACCTTCTTCACCTGTAACAGTGGATCAAGCCAATCAGACCAACCAGACCAATATTCATGTCTATCCTGATTGGGCAGCCATGCAGGCATATTATGGGCCAAGAGTCACCATGCCACCATACTACAACTCAGCTGTGGCTTCTGGTCACGCTCCTCACCCATACATGTGGGGACCACCACAGGTACCTATGATGCCACCTTATGGGCCTCCTTATGCAGCAATTTATCCACATGGAGGGGTTTATACTCACCCTGCAGTTCCTATTGGGCCACATACACATAGTCAAGGAGTTCCATCTTCACCCGCCGCTGGGACTCCTTTAAGCATAGAGACACCACCCAAATCATCTGGAAATACTGATCAGGGTTTAATGAAGAAATTGAAAGAGTTTGATGGACTTGCAATGTCAATAGGAAATGGCCATGCTGAAAGTGCAGAGCCTGGAGGTGAAAACAGGCTGTCAGAGAGTGTGGATACTGAGGGTTCCAGTGATGGAAGTGATGGCAACACTTCAGGGGCTAATCAAACAAGAAGGAAAAGAAGCCGTGAGGGAACACCAACCACTGATGGAGAAGGGAAAACTGAGATGCAAGGCAGTCCAATTTCCAAAGAGACTGCAGCTTCTAATAAGATGTTGGCAGTTGTCACTGCTGGTGTTGCAGGAACAATAGTTGGACCTGTAGTTTCTTCAGGTATGACCACCACGCTGGAGCTGAGAAATCCTTCCAGTGTTCATTCTAAAGCAAGTGCCCCACAACCTTGTCCAGTATTGCCTGCAGAAACTTGGTTACAGAATGAGCGTGAGCTGAAACGTGAGAGGCGGAAACAATCAAATCGAGAATCTGCTAGAAGGTCCAGACTAAGGAAGCAGGCTGAAACTGAAGAACTGGCACGGAAAGTTGAATCCTTGAATGCTGAGAATGCAACACTGAAATCAGAAATAAATCGACTGACCGAAAGTTCTGAAAAAATGAGGGTGGAAAATGCTACATTAAGGGGAAAACTTAAAAATGCTCAACTGAGACAAACACAAGAGATAACTTTGAACATAATTGACAGCCAGAGGGCTACACCTATAAGTACAGAAAACTTACTATCGAGAGTTAATAATAATTCCGGTTCTAATGATAGAACTGTGGAGGATGAGAATGGTTTTTGCGAAAATAAACCAAACTCTGGTGCAAAGCTGCATCAACTACTGGACACAAGTCCTAGAGCTGATGCTGTGGCAGCTGGTTGA 1281 0.4504 MGNSEEEKSTKTEKPSSPVTVDQANQTNQTNIHVYPDWAAMQAYYGPRVTMPPYYNSAVASGHAPHPYMWGPPQVPMMPPYGPPYAAIYPHGGVYTHPAVPIGPHTHSQGVPSSPAAGTPLSIETPPKSSGNTDQGLMKKLKEFDGLAMSIGNGHAESAEPGGENRLSESVDTEGSSDGSDGNTSGANQTRRKRSREGTPTTDGEGKTEMQGSPISKETAASNKMLAVVTAGVAGTIVGPVVSSGMTTTLELRNPSSVHSKASAPQPCPVLPAETWLQNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLNAENATLKSEINRLTESSEKMRVENATLRGKLKNAQLRQTQEITLNIIDSQRATPISTENLLSRVNNNSGSNDRTVEDENGFCENKPNSGAKLHQLLDTSPRADAVAAG* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g2125 426 MobiDBLite consensus disorder prediction 152 217 - -
Gso19g2125 426 MobiDBLite consensus disorder prediction 281 307 - -
Gso19g2125 426 CDD bZIP_plant_GBF1 285 333 IPR045314 GO:0003700|GO:0006355
Gso19g2125 426 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 282 345 IPR004827 GO:0003700|GO:0006355
Gso19g2125 426 MobiDBLite consensus disorder prediction 402 426 - -
Gso19g2125 426 MobiDBLite consensus disorder prediction 100 136 - -
Gso19g2125 426 MobiDBLite consensus disorder prediction 1 28 - -
Gso19g2125 426 Coils Coil 300 341 - -
Gso19g2125 426 Gene3D - 283 338 - -
Gso19g2125 426 MobiDBLite consensus disorder prediction 169 189 - -
Gso19g2125 426 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 426 IPR044827 GO:0003700|GO:0006355|GO:0043565
Gso19g2125 426 SMART brlzneu 280 344 IPR004827 GO:0003700|GO:0006355
Gso19g2125 426 PANTHER G-BOX-BINDING FACTOR 3 1 426 - -
Gso19g2125 426 MobiDBLite consensus disorder prediction 107 136 - -
Gso19g2125 426 Pfam bZIP transcription factor 280 342 IPR004827 GO:0003700|GO:0006355
Gso19g2125 426 SUPERFAMILY Leucine zipper domain 283 338 IPR046347 GO:0003700|GO:0006355
Gso19g2125 426 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 287 302 IPR004827 GO:0003700|GO:0006355
Gso19g2125 426 Pfam Disordered region downstream of MFMR 134 263 - -
Gso19g2125 426 MobiDBLite consensus disorder prediction 14 28 - -
Gso19g2125 426 Pfam G-box binding protein MFMR 1 101 IPR012900 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g2125 Gso-Chr19 49790716 49796714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g2125 1 426 bZIP Transcription Factor Family AT2G46270 52.093 3.04e-123 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso19g2125 MFMR_assoc 5.3e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g2125 K09060 - gmx:100781875 791.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g2125 19 49790716 49796714 Gso3g2171 3 46935609 46941784 GST