Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g2116 ATGAACTTATTTTGTTCATCACACATCAATATTATTATCATCCTCTCGATCTGGTCCTTCTTACCCGTGCTATGCCTATGCAACTCAAAAGCTACGTATATAGTCCACATGGACAAGTCTCACATGCCCAAAGTTTTCACCTCCTACCATAACTGGTATTCATCCACCCTTATCGACTCTGCTGCCACTCCTTCCATTTTGTACTCTTACGACAATGCACTTCACGGCTTCAGCGTTTCCTTATCACAAGAACAATTGGAGACTCTAAAACAAACCCCAGGTTTCATCTCAGCATACAGAGACAGAGAAACCACGCTGGACACCACCCAGTCTTACACCTTCCTCTCTCTCAACCACTCCCATGGCCTCTGGCCTGCTTCCAACTACGCCCAAAACGTCGTCGTTGGCGTCATCGATTCCGGAATCTGGCCTGAGAGCGAAAGCTTCAAAGACCATGGAATGGAAACTCAAACTCCTCCGAAATGGAAGGGAAAGTGCGAGGGTGGTCAAAACTTTGACTCCTCCCTATGTAACTCCAAACTCATAGGCGCAACCTACTTCAACAAAGGTCTTCTCGCAGCGCACCAAGCTGACGCTACCAAAATTGGAGCCGACTCAGTTAGAGACACCGTGGGACACGGGACCCACACTGCATCCACGGTGGCAGGAAACTACGTGAACGGGGCCTCGTATTTCGGTTACGCTAAGGGCACAGCCAGAGGAATTGCGCCACGTGCTAAAATTGCCGTGTACAAGGTTGCGTGGGCACAAGAAGTCTACGCCTCCGACATCCTAGCAGGTTTGGACAAAGCCATCGCCGACGGAGTGGACGTGATTTCAATCTCAATGGGGTTGAACATGGCGCCCTTGTATGAGGATCCTGTAGCCATAGCCGCATTCTCAGCTATGGAAAAAGGAGTTGTGGTTTCAGCTTCAGCGGGGAACGCAGGCCCGTTACTGGGGACCTTACATAACGGGATTCCGTGGGTTTTGACGGTTGGAGCGAGCAACACAGAACGTGTTTTCGGGGGGACGTTAATTCTGGGGAACGGGAAGAGGTTTTCGGGGTGGACACTGTTCCCAGCGAGTGCCACGGTCAACGGCCTTCCTCTGGTTTACCATAAGAACGTTTCGGCGTGTGACTCTTCACAACTCCTGTCACGTGTGGCGCGAGGGGGCGTGGTCATATGCGATTCTGCCGATGTTAACCTTAACGAACAGATGGAGCACGTGACTTTGTCTGGAGTGTACGGAGCGGTGTTTATATCAAGCGATCCCAAAGTGTTTGAACGGAGAAAAATGACGTGTCCCGGCCTTGTCATTAGCCCTCGGGATGGGGAAAATGTGATCAAATATGCACGAGGGACTCCACGCGCTTCCGCGACTATAAAGTTTCAAGAAACCTACCTTGGACCCAAACGGGCTCCCACGGTGGCCAGTTACAGTTCCAGAGGCCCGTCTTCGGAGTGCCCGTGGGTATTGAAGCCCGACGTCGTGGCCCCTGGCTCGTCCATTTTGGCCGCTTGGATTCCGGATGTGCCCGCGGCCCGAATTGGCCCAAATGTGGTTTTAAATACTGAATACAATTTGATGTCGGGAACGTCGATGGCCTGCCCTCATGCTTCCGGGGTGGTGGCTCTGTTGAAGAATGCACATCCTGAATGGAGTGCTTCTGCTATTAGGTCTGCGTTGACTACCACGGCTAACCCACTGGATAACACCGGAAAGCCCATTGAGGAAAGCGGAGACTGGCCTCAACGGGCTTCTCCTCTAGCCATGGGGGCTGGCCTTATTGACCCTAACCGGGCCCTTGACCCGGGCTTGATTTATGATGCCAGCCCTCAAGACTATGTTAACCTCCTCTGTGCGATGAATTTGACCCAGGCCCAAATCATGGCCATTACTAGATCAAAGGCCTACTCTAATTGCTCCAGAGCATCCTATGACCTCAATTATCCTTCTTTCGTGGCTTTCTATGCTGACAAGAGTGTGAAAGTGGAGACAAAATTCCGGAGGATTGTGACTTACGTTGGAGATGGTCCGGCTGTTTACACTGCTCGAGTGAGCTCCTACAATGGCACTGCAATCTCCGTATCTCCCAATAGGCTGGTCTTCAAGAATAAACATGAGAAACGGAAATTCACTTTGAGCTTCAAGTCTCAAATGGACAAGGACTATGATGTGGCTTTTGGTTCACTCCAATGGGTTGAAGAAACTGGAAGGCATCTTGTTAGGAGTCCCGTTGTACTGGTACCTAGGAACGTTGCCTTCAACTTCCAAACTCGGATTTAA 2292 0.5083 MNLFCSSHINIIIILSIWSFLPVLCLCNSKATYIVHMDKSHMPKVFTSYHNWYSSTLIDSAATPSILYSYDNALHGFSVSLSQEQLETLKQTPGFISAYRDRETTLDTTQSYTFLSLNHSHGLWPASNYAQNVVVGVIDSGIWPESESFKDHGMETQTPPKWKGKCEGGQNFDSSLCNSKLIGATYFNKGLLAAHQADATKIGADSVRDTVGHGTHTASTVAGNYVNGASYFGYAKGTARGIAPRAKIAVYKVAWAQEVYASDILAGLDKAIADGVDVISISMGLNMAPLYEDPVAIAAFSAMEKGVVVSASAGNAGPLLGTLHNGIPWVLTVGASNTERVFGGTLILGNGKRFSGWTLFPASATVNGLPLVYHKNVSACDSSQLLSRVARGGVVICDSADVNLNEQMEHVTLSGVYGAVFISSDPKVFERRKMTCPGLVISPRDGENVIKYARGTPRASATIKFQETYLGPKRAPTVASYSSRGPSSECPWVLKPDVVAPGSSILAAWIPDVPAARIGPNVVLNTEYNLMSGTSMACPHASGVVALLKNAHPEWSASAIRSALTTTANPLDNTGKPIEESGDWPQRASPLAMGAGLIDPNRALDPGLIYDASPQDYVNLLCAMNLTQAQIMAITRSKAYSNCSRASYDLNYPSFVAFYADKSVKVETKFRRIVTYVGDGPAVYTARVSSYNGTAISVSPNRLVFKNKHEKRKFTLSFKSQMDKDYDVAFGSLQWVEETGRHLVRSPVVLVPRNVAFNFQTRI* 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g2116 763 Gene3D - 621 751 - -
Gso19g2116 763 CDD PA_subtilisin_like 345 463 - -
Gso19g2116 763 ProSitePatterns Serine proteases, subtilase family, serine active site. 533 543 IPR023828 -
Gso19g2116 763 Pfam Peptidase inhibitor I9 32 106 IPR010259 -
Gso19g2116 763 Pfam Fibronectin type-III domain 649 749 IPR041469 -
Gso19g2116 763 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 27 107 IPR037045 -
Gso19g2116 763 Gene3D Peptidase S8/S53 domain 132 617 IPR036852 GO:0004252|GO:0006508
Gso19g2116 763 ProSiteProfiles Serine proteases, subtilase domain profile. 111 604 - -
Gso19g2116 763 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 750 IPR045051 -
Gso19g2116 763 PRINTS Subtilisin serine protease family (S8) signature 130 149 IPR015500 -
Gso19g2116 763 PRINTS Subtilisin serine protease family (S8) signature 209 222 IPR015500 -
Gso19g2116 763 PRINTS Subtilisin serine protease family (S8) signature 532 548 IPR015500 -
Gso19g2116 763 CDD Peptidases_S8_3 105 569 IPR034197 -
Gso19g2116 763 PANTHER OS01G0868800 PROTEIN 32 750 - -
Gso19g2116 763 SUPERFAMILY Subtilisin-like 11 646 IPR036852 GO:0004252|GO:0006508
Gso19g2116 763 Pfam Subtilase family 131 571 IPR000209 GO:0006508|GO:0008236
Gso19g2116 763 Gene3D - 339 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g2116 Gso-Chr19 49710454 49713304 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g2116 14 750 Subtilisin-like Serine Gene Family AT5G67360 42.057 0.0 552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g2116 - - gmx:100791444 1528.07