Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g2114 ATGAGTTGTTTTCCTTGTTTTTCAAAGACTAAGAGAACCAACAGCAAGAGGGAGCAGCAAGGCATTATACCACAGGAAAACTTTGTAACTAGAACACCGCCAGATGTAAAGAAACAAAAGGCAGATGATCCAAACCAATTTGACACCTCAAAGATTCAAGCACAAAATTTCACATTCCGTGAGCTGGCAATTGCAACAAAGAATTTCCGCCAAGAATGTTTGTTGGGTGAAGGGGGCTTTGGCAGAGTTTATAAGGGAACAATTCCTGCAACCGGGCAGGTTGTAGCAGTAAAGCAACTCGACCGAAATGGGGTCCAAGGCAGCAAGGAATTTCTGGTTGAGGTTTTGATGTTAAGTCTCTTGAACCATGACAATCTGGTCAAACTCGCTGGTTATTGTGCTGATGGAGATCAACGTCTTTTGGTCTATGAGTTTTTGCCAGGGGGCTGTTTAGAAGGCCGTCTTCTTGAGAGGAAACCAGATGAACCTGTATTAGATTGGTACAGCAGAATGAAAATAGCATCAAATGCGGCGAAAGGACTATGGTACTTGCACGACAAGGCCAATCCTTCAGTCATATACCGGGACTTGAAATCCGCCAACATCTTGCTGGATAATGATAACAATGCAAAACTATCTGATTATGGACTGGCCAAACTTGCTGGTAAAGATAAGACGAACATCGTACCAACAAGAGTTATGGGAAACTATGGTTACAGTGCTCCAGAGTACGTAAGAACGGGTAACCTCACCCTGAAATCAGATGTGTACAGTTTTGGAGTTGTCTTGCTAGAGCTCATAACTGGACGGCGTGCCATTGACACCACAAGACCGCACGATGAGCAAAATCTAGTTTCATGGGCACAACCCATATTCAGGGACCCAAAAAGATATCCAGACATGGCAGATCCAAGTCTGGAAAATAATTTCCCAGAAAAGGATCTCAACCAAGTTGTTGCAATTGCAGCAATGTGCTTACAGGAGGAAACAGCAGCGCGTCCTTTGATGAGTGATGTTGTAACTGCTCTAAGTTTTCTTTCCACCACTCCTCCAGAGGTTGTTCCTGCAGCCAAGAGTGCTGCTGCTCCTGAAAATGAAGCAGGATCTGTTAAGGACAGAGATAGCTCCTCCTCCGATGAAGGGAGTTCTAGTGAAGTAGAGGAGAATGTAACTGCTCAAAATCAGGTTAGTGCAAAATACCAAGAAAGTGAAGACGCCTCAGAAACTGAGTATGATTATTATGGGAATGAAAACCAACAAAAATACAGTCCACAAGACATCAAACAGAACAAGGAGTTCTACTCCAAATCAAGCCGCAAGAGCAGCACCAGATCAAAGAATGGAACCGCTTCTTCTAGCTACAAAAGCAGCTCCACTTCAGATTCAGAGAATGAAAGCATCTCAACCAGCAACAAAACCAGTAGGAAAAGCAGCAGAAAGAATAGCAACAAGAAGTCTTCCTTAAGCCAGAAGAGCAGTAAGAAATCTTCTTTGAGCCAAAAGAGCAGCAAGAAATCTTCTGTGAGAATCTTAAGCCACAAGAAAAGTGAGGATGTAAGCCGTTCATCTAATTCAAGCAGCAGTAGCAGCAGTGGGGTGTCACAAGATGGTGGTGATCTTTTTGATCGTAGTGGAAGCAGGCCATCAGAAGGGAATGTTTCAATTGGCCTAATCAGCAGTGAGAACTCAGACAACGACAGCAGCATAAGGTCAGAAGAAAGGAGCAGCATGCATTTAGATCATACCAGCAGCAGATCGGAGGAGGGAAGTGTTTATTACCGATAG 1785 0.4381 MSCFPCFSKTKRTNSKREQQGIIPQENFVTRTPPDVKKQKADDPNQFDTSKIQAQNFTFRELAIATKNFRQECLLGEGGFGRVYKGTIPATGQVVAVKQLDRNGVQGSKEFLVEVLMLSLLNHDNLVKLAGYCADGDQRLLVYEFLPGGCLEGRLLERKPDEPVLDWYSRMKIASNAAKGLWYLHDKANPSVIYRDLKSANILLDNDNNAKLSDYGLAKLAGKDKTNIVPTRVMGNYGYSAPEYVRTGNLTLKSDVYSFGVVLLELITGRRAIDTTRPHDEQNLVSWAQPIFRDPKRYPDMADPSLENNFPEKDLNQVVAIAAMCLQEETAARPLMSDVVTALSFLSTTPPEVVPAAKSAAAPENEAGSVKDRDSSSSDEGSSSEVEENVTAQNQVSAKYQESEDASETEYDYYGNENQQKYSPQDIKQNKEFYSKSSRKSSTRSKNGTASSSYKSSSTSDSENESISTSNKTSRKSSRKNSNKKSSLSQKSSKKSSLSQKSSKKSSVRILSHKKSEDVSRSSNSSSSSSSGVSQDGGDLFDRSGSRPSEGNVSIGLISSENSDNDSSIRSEERSSMHLDHTSSRSEEGSVYYR* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g2114 594 Pfam Protein kinase domain 71 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso19g2114 594 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Gso19g2114 594 CDD STKc_IRAK 75 343 - -
Gso19g2114 594 ProSiteProfiles Protein kinase domain profile. 69 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso19g2114 594 SUPERFAMILY Protein kinase-like (PK-like) 55 356 IPR011009 -
Gso19g2114 594 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524
Gso19g2114 594 SMART serkin_6 69 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso19g2114 594 MobiDBLite consensus disorder prediction 440 476 - -
Gso19g2114 594 Gene3D Phosphorylase Kinase; domain 1 31 145 - -
Gso19g2114 594 Gene3D Transferase(Phosphotransferase) domain 1 147 354 - -
Gso19g2114 594 MobiDBLite consensus disorder prediction 355 594 - -
Gso19g2114 594 MobiDBLite consensus disorder prediction 521 537 - -
Gso19g2114 594 MobiDBLite consensus disorder prediction 483 506 - -
Gso19g2114 594 MobiDBLite consensus disorder prediction 547 565 - -
Gso19g2114 594 MobiDBLite consensus disorder prediction 1 21 - -
Gso19g2114 594 PANTHER RECEPTOR KINASE-LIKE PROTEIN 1 579 - -
Gso19g2114 594 PANTHER OS07G0668900 PROTEIN 1 579 - -
Gso19g2114 594 MobiDBLite consensus disorder prediction 566 587 - -
Gso19g2114 594 MobiDBLite consensus disorder prediction 412 431 - -
Gso19g2114 594 MobiDBLite consensus disorder prediction 382 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g2114 Gso-Chr19 49692473 49695716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g2114 1 388 Glycoside Hydrolase AT3G07070 61.250 4.36e-165 475
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Gso19g2114 Pkinase 1.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g2114 - - gmx:100790911 1006.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g2114 19 49692473 49695716 Gso3g2160 3 46853061 46856411 GST