Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g2107 ATGGAATCCAAGAAGCAGTGGAACGAAGGAGCCAATTCATCCATCTCAATGGTTAATTATATGATTGATGACAAAGAAACAAAAATTTCAGCACTGATTGTGGATGATGACGCTATCATTCGCAAAATCCACAAGACCATGCTCGAGCGCTTATTTAACATAGAGGCAAAAACGGTTAGGGATGGAAAGGAAGCAGTGGATTTGTGTCGTTCTGGGGAAAATTTTGACATAATTTTCATGGACAAAGAAATGCCTATCATGGATGGTCACGAGGCGACAAAACATCTACGTGCTATGGGTGTGAAGAGCATCATTGTGGGAATCACTACCCGTGCTGATGGAAAAGATAAAGAGGAATTTCTAGCTTCAGGATCGAACCATTGCTTTGAGAAGCCTCTTGACCAAGCAAAGGTTGAAAAAGTCTTGCAAGAGCATGGAAATTTTAGCATTTGA 453 0.4084 MESKKQWNEGANSSISMVNYMIDDKETKISALIVDDDAIIRKIHKTMLERLFNIEAKTVRDGKEAVDLCRSGENFDIIFMDKEMPIMDGHEATKHLRAMGVKSIIVGITTRADGKDKEEFLASGSNHCFEKPLDQAKVEKVLQEHGNFSI* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g2107 150 ProSiteProfiles Response regulatory domain profile. 30 146 IPR001789 GO:0000160
Gso19g2107 150 PANTHER TWO-COMPONENT RESPONSE REGULATOR 16 146 - -
Gso19g2107 150 SMART REC_2 29 142 IPR001789 GO:0000160
Gso19g2107 150 CDD REC_hyHK_CKI1_RcsC-like 32 142 - -
Gso19g2107 150 Pfam Response regulator receiver domain 32 142 IPR001789 GO:0000160
Gso19g2107 150 Gene3D - 11 147 - -
Gso19g2107 150 SUPERFAMILY CheY-like 28 145 IPR011006 -
Gso19g2107 150 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 16 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g2107 Gso-Chr19 49629626 49630205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g2107 22 138 Response Regulator Gene Family AT3G04280 47.059 1.73e-29 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gso19g2107 Response_reg 2e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g2107 - - gmx:102665311 300.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g2107 19 49629626 49630205 Gso3g2152 3 46789293 46789785 GST