Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso19g2096 | ATGGAAAGAGGTTTGCTTCTTTTGTTGTTCTTGTTGTTGGTTATGGTGCTTTCTGTTTATGCCAACGATGTGGAATATTCACAGTGCAATTGTGATGAGGAAGGGCTTTGGAGCATCCACAGCGTGCTGGTTTGTCAGAAAGTGAGTGACTTTTTCATTGCCATTGCATATTTTTCCATACCCCTTGAGCTTCTTTACTTTGTGAGCTGCTCCAATGTCCCCTTTAAATTGGTCTTCCTTCAATTCATTGCCTTCATAGTTCTCTGTGGATTGACCCATTTGCTCAATGCCTATACTTACTATGGCCCTCACTCCTTCCAGTTGTTTCTTTCCCTTACTGTTGCTAAGTTCCTCACTGCTCTTGTTTCTTGTGCCACTGCAATTTCCTTTCCCACACTCATTCCTCTTTTGCTGAAAATCAAAGTGAGGGAGCTATTTTTGAGGCAGAATGTGTTGGAATTGGGCCAAGAGGTTGGGATGATGAAGAAACAGAAGGAAGCTAGTTGGCATGTTAGGATGCTCACTTGTGAGATTAGGAAATCTCTGGATAAGCATACCATCTTGTATACCACACTTGTTGAGCTTTCCAAGGCATTGGATTTGCACAATTGTGCAGTATGGATGCCTGATGAGGATAGGAGAGAAATGCATTTGACTCATGAGTTGAAACCAAGCTCAGCGAGGAGTTTTCACAATTCTATTGCTATCAGTGATCCTGATGTGTTGGACATAAAGAAGAGCCAAGGGGTGTGGATTTTGAGGCCTGATTCTGCACTAGGAGCCGCAAGTAGTGGTGGTGGATCTGGGGATTCTGGTGCTGTGGCTGCCATTCGCTTGCCAATACTTCATGTTTCGAATTTCAAAGGAGGGACACCAGAGTTGGTTGAAACATCTTATGGTGTACTGGTTTTGGTTCTTCCAAATTCAAACTCCAGGGCTTGGACCTCCCATGAAATGGAGATAGTGGAAGTTGTTGCTGACCAGGTGGCTGTGGCATTGTCTCATGCGTCTGTTCTTGAAGAGTCACAGCTAATGAGCCAGAAACTTGCAGAGCAAAACCGGGCGTTGCAACAGGCTCAAAAGAATGCAATGATGGCAAGGAAGGCTAGGAGCTCGTTTGAGAAAGTTATGAGTCATGGAATGCGGAGACCTATGCATTCAATCCTGGGCTTGCTTTCAATGTTTCAAGAGGATAATATAAGACCTGAACAGAAGATTGTTATTGACTCAATTTTGAAAGTTAGCAATGCACTATCGCGATTGATTAATGATGTGATGGAGATTGCAGAAAATGACAATGGAAGCTTCCAGTTAGAGATGAAACCTTTCCATCTACATTCAATGATGAGGGAAGCTTCTTGCACTGCCAAGTGTTTGTGTATATATAAAGGCTTTGGTCTTGAAGTTGATGTTGACAAGTCTTTGCCTGATCTGGTCATAGGTGATGAGGCAAGGACTTTCCAAGTAATTTTACATATGATTGGCTATTTATTGAACATATATGATAAAGGGACTCTCACTTTTCAAGTTTACCTTGAAAGTGATAGCGGAGATAAAGATGATAGAAGTTTTGGAATATGGAGATCAAGCATACAAAATGAGTATGTTCATATAAAATTTAATTTTCAGATAAATGGTATTAGTTTCCATTCAGATGAATCAGTTTCAACAAGAAATTATACTGGTAGAAATCACTGCAACAATGAACTTAAGGAAGGCCTGAGCTTCAGCATGTGCAAAACGCTGGTGCAGATGATGCAAGGTAATATTTGGATATCAACTAACTCTCTGGGTTTTGCACAAGGAATGACACTTCTTCTCAAGTTTCAGATAGGATCATCTCATGGAAGATTCATTCTTGCTCCCAAAGAGTTTTCAAACTCTCAGTTTAGGGGGCTTAAGGTTGTTTTGGCTGATGATGATGATGTAAACAGGACTGTGACCAAGAAGCTGCTCGAGAAACTGGGGTGTCAAGTAACTGCTGTTTCATCAGGATTTGAATGTCTTGGTGCTATAAGTGCCTCTGGTAACTCATTCAAAATTATTATGTTGGATCTTCACATGCCAGAAATGGATGGTTTTGAAGTTGCAAGAAGGATTCGGAAGTTCCAAAGCCATAATTGGCCCTTGATCATTGCTTTTACTGCAAGTGCAGAAGAACACATCAAGGAGAGATGTCTACAGGTGGGAATGAATGGATTGATTCGAAAACCTATCCTCCTTCATGAGATGGCAGATGAACTTAGAACAGTCCTGCACCGTGCAGGTGAAAAATTGTGA | 2280 | 0.414 | MERGLLLLLFLLLVMVLSVYANDVEYSQCNCDEEGLWSIHSVLVCQKVSDFFIAIAYFSIPLELLYFVSCSNVPFKLVFLQFIAFIVLCGLTHLLNAYTYYGPHSFQLFLSLTVAKFLTALVSCATAISFPTLIPLLLKIKVRELFLRQNVLELGQEVGMMKKQKEASWHVRMLTCEIRKSLDKHTILYTTLVELSKALDLHNCAVWMPDEDRREMHLTHELKPSSARSFHNSIAISDPDVLDIKKSQGVWILRPDSALGAASSGGGSGDSGAVAAIRLPILHVSNFKGGTPELVETSYGVLVLVLPNSNSRAWTSHEMEIVEVVADQVAVALSHASVLEESQLMSQKLAEQNRALQQAQKNAMMARKARSSFEKVMSHGMRRPMHSILGLLSMFQEDNIRPEQKIVIDSILKVSNALSRLINDVMEIAENDNGSFQLEMKPFHLHSMMREASCTAKCLCIYKGFGLEVDVDKSLPDLVIGDEARTFQVILHMIGYLLNIYDKGTLTFQVYLESDSGDKDDRSFGIWRSSIQNEYVHIKFNFQINGISFHSDESVSTRNYTGRNHCNNELKEGLSFSMCKTLVQMMQGNIWISTNSLGFAQGMTLLLKFQIGSSHGRFILAPKEFSNSQFRGLKVVLADDDDVNRTVTKKLLEKLGCQVTAVSSGFECLGAISASGNSFKIIMLDLHMPEMDGFEVARRIRKFQSHNWPLIIAFTASAEEHIKERCLQVGMNGLIRKPILLHEMADELRTVLHRAGEKL* | 760 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso19g2096 | 759 | SMART | gaf_1 | 183 | 343 | IPR003018 | GO:0005515 | |
Gso19g2096 | 759 | SUPERFAMILY | GAF domain-like | 186 | 336 | - | - | |
Gso19g2096 | 759 | CDD | REC_ETR-like | 633 | 748 | - | - | |
Gso19g2096 | 759 | Pfam | His Kinase A (phospho-acceptor) domain | 370 | 434 | IPR003661 | GO:0000155|GO:0007165 | |
Gso19g2096 | 759 | Pfam | Response regulator receiver domain | 635 | 747 | IPR001789 | GO:0000160 | |
Gso19g2096 | 759 | SMART | HisKA_10 | 369 | 434 | IPR003661 | GO:0000155|GO:0007165 | |
Gso19g2096 | 759 | PANTHER | TWO-COMPONENT HISTIDINE KINASE | 5 | 752 | - | - | |
Gso19g2096 | 759 | Gene3D | - | 633 | 758 | - | - | |
Gso19g2096 | 759 | SMART | REC_2 | 633 | 748 | IPR001789 | GO:0000160 | |
Gso19g2096 | 759 | CDD | HisKA | 368 | 429 | IPR003661 | GO:0000155|GO:0007165 | |
Gso19g2096 | 759 | Gene3D | - | 333 | 432 | - | - | |
Gso19g2096 | 759 | Gene3D | - | 433 | 613 | IPR036890 | - | |
Gso19g2096 | 759 | Coils | Coil | 339 | 369 | - | - | |
Gso19g2096 | 759 | ProSiteProfiles | Histidine kinase domain profile. | 376 | 613 | IPR005467 | - | |
Gso19g2096 | 759 | Gene3D | - | 174 | 332 | IPR029016 | - | |
Gso19g2096 | 759 | SUPERFAMILY | Homodimeric domain of signal transducing histidine kinase | 354 | 434 | IPR036097 | GO:0000155|GO:0007165 | |
Gso19g2096 | 759 | CDD | HATPase_ETR2_ERS2-EIN4-like | 475 | 607 | - | - | |
Gso19g2096 | 759 | SUPERFAMILY | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 438 | 595 | IPR036890 | - | |
Gso19g2096 | 759 | Pfam | GAF domain | 185 | 333 | IPR003018 | GO:0005515 | |
Gso19g2096 | 759 | ProSiteProfiles | Response regulatory domain profile. | 634 | 752 | IPR001789 | GO:0000160 | |
Gso19g2096 | 759 | PANTHER | ETHYLENE RECEPTOR | 5 | 752 | - | - | |
Gso19g2096 | 759 | SUPERFAMILY | CheY-like | 629 | 754 | IPR011006 | - | |
Gso19g2096 | 759 | PIRSF | Ethylen_sen_hybr_HK | 1 | 759 | IPR014525 | GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso19g2096 | Gso-Chr19 | 49503512 | 49507617 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso19g2096 | 21 | 757 | Miscellaneous Gene Families | AT3G04580 | 62.083 | 0.0 | 926 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Others | Gso19g2096 | GAF | 2.1e-12 | CL0161 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso19g2096 | K14509 | - | gmx:100805023 | 1398.65 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso19g2096 | 19 | 49503512 | 49507617 | Gso19g2096 | 19 | 49503512 | 49507617 | ECH | |
Gso19g2096 | 19 | 49503512 | 49507617 | Gso3g2141 | 3 | 46674082 | 46678139 | GST |