Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g2079 ATGGATTGGGCTTTTGTGCATAAAACCTGGGATAAGTGGGCTTCTACAAACATTGGTTATTCTGGTCATCCGTTAAAAGCTGCTTTGCTAATTAATTATGACCCGACTGGACCATCTCGATTGTTATCTACCATTGCTGAACAAGAAGGGATAAGAGCTAATCCCATTGAATTGAGTCACTTTGTGGACTTCATCAAACAAAATAAACTCCAGTCCGAGCTCTTCATTATTGGGTCCAATCAGTACTTGGTCACGTCAATTCATGAGAACTGGTTTAGTGCAAGGTGTATAAACACATCGAAGCCTGCCGGTGAAGGTGCAATTGTTATACAAACAGCAGCTTATATCTTGGTTGCTCTGTACGAAGGTTCCATTGGTCCAGCATCTCGGGCTATGGCAGCTGCTGATCAGTTAACTTGGCAATTAGGGCGAAAAAATCTTTAA 444 0.4189 MDWAFVHKTWDKWASTNIGYSGHPLKAALLINYDPTGPSRLLSTIAEQEGIRANPIELSHFVDFIKQNKLQSELFIIGSNQYLVTSIHENWFSARCINTSKPAGEGAIVIQTAAYILVALYEGSIGPASRAMAAADQLTWQLGRKNL* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g2079 147 Pfam Profilin 9 142 IPR005455 GO:0003779
Gso19g2079 147 Gene3D Dynein light chain 2a, cytoplasmic 9 146 - -
Gso19g2079 147 PANTHER OS05G0241400 PROTEIN 1 147 - -
Gso19g2079 147 SUPERFAMILY Profilin (actin-binding protein) 10 142 IPR036140 -
Gso19g2079 147 PANTHER OS05G0241400 PROTEIN 1 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g2079 Gso-Chr19 49341530 49343633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g2079 1 147 Carbohydrate Esterase AT4G19410 68.919 9.59e-72 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g2079 - - gmx:100811973 300.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g2079 19 49341530 49343633 Gso3g2122 3 46505917 46508042 GST