Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g2069 ATGCAACATTCCAGTGCAAAAGGTCTTTTGCTTTCTCTTGTTTGTGTCTTTGTTCTGTTGAATGAGATTGATGCTGGTGCTTGGAATGAGGAGCCAGGTTCTTTGATCTTGGGTTGTGGGTTGGATGGAGGGGGTGCCAAAGATGCTGATGGAAGACAATGGAGCCCTGATAGCAAGTTCTTGGGGCCAGAAGGTGGCTCAATCACATCCAAAGCCTCTTACCAAGATCCTTCTCTTATGTCTGAGATTCCATACATGTCAGCACGTGTTTTCACATCCGAGACAACATACAAATTCCCCGTCCAACCCGATAAGCGCTATTGGCTCAGGCTCCATTTTTACCCTGCTCTTTATGGCAGTTTCAATCCCTCTGACTCATATTTCTCCGTGACTGCAAATGGGGTTACCCTCCTCTCCAATTTCAGCGCTACAACCACTTGTGAGGCCCTCTCACAGGCCTACATTGATAGAGAGTACTCCCTTGCACCTTTGAATTCAGATGCCTTGACTCTCACCTTCAAGCCTTCTGATAAATACAATGGCACATTCGCTTTTGTCAACGGCCTTCAGCTGATCCCGATGCCCGAGTTGTTTGATTCTGGGGCATTGGTAGGTTATGCTGACCAAACCACGGATGTGAAGAGCTTGAATTTGCAAACCATGGTTAGGCTAAATGTTGGTGGACAGTACATATCTCCAACACACGACTCTGGCCTTACAAGGATGTGGTATGATGACACGCCTTACCTTTATGGTGCAGGCACTGGTGTGACCAACCAAGCTGAGAAGAATGTTCCAATTGATTACCAGACCATGCCAAAGTACATTGCTCCTTCTGATGTTTACTCCACGTCAAGATCAATGGGGACTGACAAGGATGTCAACATGGGCTTCAATCTCACATGGATCTTCCAAGTTGATCCCAATTCCATGTACCTTGTAAGGTTGCATTTTTGTGATTACTATTACTCCAAGGTCAATGAGATTGTTTTCGACGTATTTCTCAACAACCAAACGGCACAAGCTCAAGCTGATGTCATAGGGTGGACAGGAGGTAAGGGAGTGCCAACTTATAAGGACTATGTGATATATGTCCAAGATGGGGAGGGTGATGACAAGCTTTGGCTGGCTCTCCACCCTTCACCTGACTCAAAGCCCGAGTACTATGATGCCATGCTCAATGGAGTGGAAATATTCAAGCTCAATGACACAGACTTGTCTGGTCCCAATCCTCAGCTTTCGGAGATGCTCCTCAGGCAGCAGAAAGAGGATGAGGAAGCAGGTTTCACTAGCCACAGAGCATATCACAAGCATGCTGTTATTGGTGGAGCTGCTGGAGGTGCTGCTGGTTTAGCTTTTATGGCTGCATTATGCGTTGTGTACAACAAGAAGAAGAGAGCTCCAGGGTCAGAGGGTCAGACAAGCTGGCTTCCCATCTATTTGAACTCACACAGCAAATCCTCTGCCTCGTCTGGGAAGAGCGTTAGCAGTGCCAACTTATCTGCCATGGCTCAAGGTCTTTGCCGTTATTTCTCCTTGCAAGAGATAAAGCAAGCGACGAAGAATTTTGACGAGGCCAACGTCATTGGTGTTGGTGGATTTGGAAAGGTGTACAAGGGTGTCATTGATAATGGAATGAAGGTGGCAATCAAGAGGTCAAACCCGCAGTCAGAACAAGGAGTTAATGAGTTCCAAACGGAAATAGAAATGCTTTCCAAGCTGAGACACAAGCATTTGGTGTCCTTGATTGGGTTCTGCGAGGAAAATGATGAGATGTGCCTGGTTTATGACTTCATGGCTCTTGGCACCATGAGAGAGCATCTTTACAAGGGCAACAAGCCTATGTCTACTCTGTCATGGAAGCAAAGGTTGGAGATTTGCATTGGAGCTGCAAGAGGGCTTCACTACCTTCACACTGGGGCTAAGTACACCATCATTCATAGAGATGTCAAAACAACAAACATTCTCTTGGATGAAAACTGGAATGCCAAGGTTTCAGATTTTGGCTTGTCTAAAACGGGTCCAAACATGAACACTGGTCATGTTAGTACTGTGGTGAAGGGAAGTTTTGGCTACTTGGATCCTGAATACTTCAGGAGGCAACAGTTGACTGAAAAATCTGATGTATACTCATTTGGGGTTGTTCTGTTTGAAGCGCTGTGTGCCAGGCCGGTTCTCAATCCTAGCCTTCCAAAGGAACAGGTCAGTCTTGCTGATTGGGCATTGCTTTGCAAGCAGAAAGGAACTCTAGAGGATCTCATTGACCCATGTCTCAAGGGAAAGATCAATCCAGAAAGCTTGAACAAGTTTGTAGACACGGCTGAAAAGTGCTTGTCTGATCATGGTACCGATCGTCCCTCCATGAATGATCTCTTGTGGAATCTCGAATTCGCTCTCAACCTGCAAGAAAATGTTGAAGGTGGTTCAACTCATTCTGCTCGTGCTGAGGAAAGTAACTTTGAAGATGTAGGCTTGGGAGACAACGACATGGCACGTCACTATAAAAACTTGAGCCTCGGAAGTGAGCATGACCTTAGCAGCGATTCTAATGAGAATCCAAATGCCATCTTGTCAGAATTTGTCAATCCAAAAGGACGATAA 2601 0.4591 MQHSSAKGLLLSLVCVFVLLNEIDAGAWNEEPGSLILGCGLDGGGAKDADGRQWSPDSKFLGPEGGSITSKASYQDPSLMSEIPYMSARVFTSETTYKFPVQPDKRYWLRLHFYPALYGSFNPSDSYFSVTANGVTLLSNFSATTTCEALSQAYIDREYSLAPLNSDALTLTFKPSDKYNGTFAFVNGLQLIPMPELFDSGALVGYADQTTDVKSLNLQTMVRLNVGGQYISPTHDSGLTRMWYDDTPYLYGAGTGVTNQAEKNVPIDYQTMPKYIAPSDVYSTSRSMGTDKDVNMGFNLTWIFQVDPNSMYLVRLHFCDYYYSKVNEIVFDVFLNNQTAQAQADVIGWTGGKGVPTYKDYVIYVQDGEGDDKLWLALHPSPDSKPEYYDAMLNGVEIFKLNDTDLSGPNPQLSEMLLRQQKEDEEAGFTSHRAYHKHAVIGGAAGGAAGLAFMAALCVVYNKKKRAPGSEGQTSWLPIYLNSHSKSSASSGKSVSSANLSAMAQGLCRYFSLQEIKQATKNFDEANVIGVGGFGKVYKGVIDNGMKVAIKRSNPQSEQGVNEFQTEIEMLSKLRHKHLVSLIGFCEENDEMCLVYDFMALGTMREHLYKGNKPMSTLSWKQRLEICIGAARGLHYLHTGAKYTIIHRDVKTTNILLDENWNAKVSDFGLSKTGPNMNTGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPVLNPSLPKEQVSLADWALLCKQKGTLEDLIDPCLKGKINPESLNKFVDTAEKCLSDHGTDRPSMNDLLWNLEFALNLQENVEGGSTHSARAEESNFEDVGLGDNDMARHYKNLSLGSEHDLSSDSNENPNAILSEFVNPKGR* 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g2069 866 PANTHER OS07G0166700 PROTEIN 22 853 IPR045272 GO:0004714|GO:0006468
Gso19g2069 866 ProSitePatterns Serine/Threonine protein kinases active-site signature. 645 657 IPR008271 GO:0004672|GO:0006468
Gso19g2069 866 MobiDBLite consensus disorder prediction 841 866 - -
Gso19g2069 866 Pfam Malectin-like domain 38 400 IPR024788 -
Gso19g2069 866 CDD STKc_IRAK 529 796 - -
Gso19g2069 866 ProSitePatterns Protein kinases ATP-binding region signature. 529 551 IPR017441 GO:0005524
Gso19g2069 866 Gene3D Transferase(Phosphotransferase) domain 1 599 817 - -
Gso19g2069 866 SUPERFAMILY Protein kinase-like (PK-like) 498 798 IPR011009 -
Gso19g2069 866 ProSiteProfiles Protein kinase domain profile. 523 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso19g2069 866 Pfam Protein tyrosine and serine/threonine kinase 527 792 IPR001245 GO:0004672|GO:0006468
Gso19g2069 866 Gene3D - 216 402 - -
Gso19g2069 866 Gene3D - 38 193 - -
Gso19g2069 866 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 22 853 - -
Gso19g2069 866 MobiDBLite consensus disorder prediction 808 827 - -
Gso19g2069 866 SMART serkin_6 523 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso19g2069 866 Gene3D Phosphorylase Kinase; domain 1 483 598 - -
Gso19g2069 866 MobiDBLite consensus disorder prediction 841 857 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g2069 Gso-Chr19 49248467 49251784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g2069 35 866 Receptor kinase-like Gene Family AT3G51550 52.403 0.0 860
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gso19g2069 Malectin_like 8.5e-36 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g2069 - - gmx:102659961 1702.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g2069 19 49248467 49251784 Gso3g2108 3 46383168 46386562 GST
Gso19g2069 19 49248467 49251784 Gso10g1494 10 41327004 41330318 PCT
Gso10g1494 10 41327004 41330318 Gso19g2069 19 49248467 49251784 PCT