Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g2058 ATGGAGTTTCCTACGAACCTTTTGCCAGACGAAGCGAGCCCAGAATGGATGAACAAAGGAGACAATGCATGGCAGCTTATGGCAGCAACTGTGGTGGGTCTCCAAAGCATTCCGGGGCTGGTGATTCTCTACGGAAGCCTAGTGAAAAAAACATGGGCCATTAACTCTGCTTTCATGGCCTTCTACGCCTTCGCGGGGGTACTTCTATGCTGGGTGGGGTGGGGATTCCGCATGTCATTCGGCGAGAAAATGGTGTTCTTCTTGGGGAAACCCGGGGTGGCGGTGGACGAGAAGTTTCTTCTGGGGAAAGCTTTTCTGGGGCTCTTTCCCAATGCTACGATGGTGTTTTTTCAGGGGGTGTTTGCGGGGATCACCTTGATCTTGATAGCTGGGGCGTTGCTCGGGAGGATGAACTTTCGTGCGTGGATGCTGTTTGTGCCTCTTTGGCTTACTTTTTCGTACACCGTCACTGCCTTTAGCATTTGGTGCCCCGATGGCTGGTTGGCAAAGCTTGGAGTTATTGATTTCTCTGGCGGATATGTTATTCACCTCTCCGCCGGAGTTGCTGGTTTTACTGCAGCTTATTGGGTGGGTCCACGATCTGAAAAGGACAGAGAAATATTTGCATCAAACAACATGATTGTGGTGCTTGCAGGCGCAGGCCTGCTTTGGATGGGTTGGAGTGGGTTCAACGGTGGAGGTCCGTTCGTGGCGAGCACGGTGGCATCTCTGGCCGTCCTTAACACACACGTGTGTGCTGCTGCTAGCATCATCGTCTGGGTCCTACTCGACACTTTCTACTTTGGTAAGCCCACTGTGTTTGGCGCCGTACAGGGCATGATCACTGGTCTCGTTTGCATCACACCTGCCGCAGGAGTTGTGCAAGGGTGGGCAGCGATCTTGATGGGTGTGATGTCAGGAAGCATTCCCTGGTACACAATGATGATCCTCCATGACAAGCTCCCATTCCTAAAGCAAATCGACGACCCCATGGCGGTGTTCCACACCCATGCCGTCGCCGGCGCTCTCGGCGGCGTCCTCACGGGGCTCTTGGCGGTGCCTAAACTGTGCCGTCTCTTCTACATGGTCCCCGATTGGGAAAAATACATTGGACTCGCCTATGGCCTCCAGAACGGTGCAACTCATGCGGGTCTAAGGCAAATGGCCATCCAAGTTGGGGCCATAGTTTTCGTTATTATCTTCAACTTTGTTACGACCAGCTTGATTTGCTTGCTCGTGGGGTCCATAGTACCACTCAGGATTGACACCGATGCTTTGCAAATGGGTGACAAGGCAATGCATGGAGAAGAGGCTTTCGCTTTCTATGGAGGAGACCCTACAGCAAAGTTTGAGAACCTCAAGCACAATAAAGTTTATGATACTCAAGACTTTTCGTTTGTTAGAGACACAAGGTCATTTGCCCAGCTTCAAATGGTATAA 1440 0.5167 MEFPTNLLPDEASPEWMNKGDNAWQLMAATVVGLQSIPGLVILYGSLVKKTWAINSAFMAFYAFAGVLLCWVGWGFRMSFGEKMVFFLGKPGVAVDEKFLLGKAFLGLFPNATMVFFQGVFAGITLILIAGALLGRMNFRAWMLFVPLWLTFSYTVTAFSIWCPDGWLAKLGVIDFSGGYVIHLSAGVAGFTAAYWVGPRSEKDREIFASNNMIVVLAGAGLLWMGWSGFNGGGPFVASTVASLAVLNTHVCAAASIIVWVLLDTFYFGKPTVFGAVQGMITGLVCITPAAGVVQGWAAILMGVMSGSIPWYTMMILHDKLPFLKQIDDPMAVFHTHAVAGALGGVLTGLLAVPKLCRLFYMVPDWEKYIGLAYGLQNGATHAGLRQMAIQVGAIVFVIIFNFVTTSLICLLVGSIVPLRIDTDALQMGDKAMHGEEAFAFYGGDPTAKFENLKHNKVYDTQDFSFVRDTRSFAQLQMV* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g2058 479 SUPERFAMILY Ammonium transporter 16 421 - -
Gso19g2058 479 Pfam Ammonium Transporter Family 23 438 IPR024041 GO:0008519|GO:0016020|GO:0072488
Gso19g2058 479 PRINTS Rhesus blood group protein signature 118 134 IPR002229 GO:0005887
Gso19g2058 479 PRINTS Rhesus blood group protein signature 214 232 IPR002229 GO:0005887
Gso19g2058 479 PRINTS Rhesus blood group protein signature 245 267 IPR002229 GO:0005887
Gso19g2058 479 PRINTS Rhesus blood group protein signature 338 354 IPR002229 GO:0005887
Gso19g2058 479 PANTHER AMMONIUM TRANSPORTER MEP2 1 479 IPR001905 GO:0008519|GO:0016020|GO:0072488
Gso19g2058 479 ProSitePatterns Ammonium transporters signature. 175 200 IPR018047 GO:0008519|GO:0016020|GO:0072488
Gso19g2058 479 PANTHER AMMONIUM TRANSPORTER 1 479 - -
Gso19g2058 479 Gene3D Ammonium transporter AmtB like domains 7 443 IPR029020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g2058 Gso-Chr19 49148999 49152568 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g2058 112 471 Inorganic Solute Cotransporters AT2G38290 52.473 3.41e-122 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g2058 K03320 - gmx:100782944 948.347